Pseudomonas aeruginosa PAO1, PA2153 (glgB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003844 1,4-alpha-glucan branching enzyme activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 3013861 Reviewed by curator
Biological Process GO:0006091 generation of precursor metabolites and energy
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02922
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02922
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003844 1,4-alpha-glucan branching enzyme activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043169 cation binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02806
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005978 glycogen biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Starch and sucrose metabolism ECO:0000037
not_recorded
PseudoCyc GLYCOGENSYNTH-PWY glycogen biosynthesis I (from ADP-D-Glucose) 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae00500 Starch and sucrose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd02855 E_set_GBE_prok_N IPR044143 Glycogen branching enzyme GlgB, N-terminal Early set domain 123 226 1.39208E-52
Gene3D G3DSA:2.60.40.10 Immunoglobulins IPR013783 Immunoglobulin-like fold 13 107 4.2E-5
PANTHER PTHR43651 1,4-ALPHA-GLUCAN-BRANCHING ENZYME - - 118 728 0.0
SUPERFAMILY SSF51445 (Trans)glycosidases IPR017853 Glycoside hydrolase superfamily 185 621 2.64E-116
Pfam PF00128 Alpha amylase, catalytic domain IPR006047 Glycosyl hydrolase, family 13, catalytic domain 280 351 5.6E-9
SUPERFAMILY SSF81296 E set domains IPR014756 Immunoglobulin E-set 143 200 5.6E-10
Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPR004193 Glycoside hydrolase, family 13, N-terminal 130 212 1.9E-23
FunFam G3DSA:2.60.40.1180:FF:000002 1,4-alpha-glucan branching enzyme GlgB - - 625 731 6.7E-36
FunFam G3DSA:3.20.20.80:FF:000003 1,4-alpha-glucan branching enzyme GlgB - - 229 624 0.0
NCBIfam TIGR01515 JCVI: 1,4-alpha-glucan branching enzyme IPR006407 1,4-alpha-glucan-branching enzyme, GlgB 114 729 0.0
Gene3D G3DSA:3.20.20.80 Glycosidases - - 228 624 0.0
Pfam PF02806 Alpha amylase, C-terminal all-beta domain IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta 633 729 3.5E-21
PIRSF PIRSF000463 GlgB IPR037439 1,4-alpha-glucan-branching enzyme 12 732 0.0
SUPERFAMILY SSF81296 E set domains IPR014756 Immunoglobulin E-set 21 119 1.54E-15
Gene3D G3DSA:2.60.40.10 Immunoglobulins IPR013783 Immunoglobulin-like fold 108 225 4.8E-38
SMART SM00642 aamy IPR006047 Glycosyl hydrolase, family 13, catalytic domain 256 624 7.6E-7
FunFam G3DSA:2.60.40.10:FF:000169 1,4-alpha-glucan branching enzyme GlgB - - 108 226 1.1E-46
CDD cd11322 AmyAc_Glg_BE - - 218 617 0.0
Gene3D G3DSA:2.60.40.1180 - IPR013780 Glycosyl hydrolase, all-beta 629 731 2.0E-31
Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. IPR006407 1,4-alpha-glucan-branching enzyme, GlgB 106 731 44.597626
SUPERFAMILY SSF51011 Glycosyl hydrolase domain - - 630 730 2.64E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.