Strain | Pseudomonas aeruginosa BL19 genomic scaffold adgeJ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCTATGTCGGCGAGAACGCCCTGTTCGAGCAACAACTGCTCAGTGGTGAGCTGGAAGTCGAACTGACCCCGCAAGGCTCGCTGGCCGAGAAGATCCGC GCCGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCAAGGAGGCGCGCGAGTTCAATGGCCGCCACTACA TCCTCGAACCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAACGTCGTCTATCGCCACACCGCGCAGAACTTCAA CCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTGGAGGAGATCGTCGAGCCCGGCGAACTGGACCCGACGCAGATCCACACCCCCGGCATC TACGTCGACCGGATCATCCAGGGTCGCTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGACGGCGGCCGCTACAACGACAAGAGGTTTCCCCAG
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DNA Sequence for Gene |
>Q073_02477
ATGGCACTTACCCGCGAACAGATGGCGCAGCGCGTGGCGCGCGAATTGAAGGACGGCTACTACGTCAACCTCGGCATCGGCATCCCGACCCTGGTGGCCA ACTACGTGCCGGAAGGCATCGACGTCATGCTCCAGTCGGAGAACGGCCTGCTCGGCATGGGCGCGTTCCCCAGCGAGGCGGAAGTCGACGCCGACATGAT CAACGCCGGCAAGCAGACCGTGACCGCCCGCGTCGGCGCGTCGATCTTCGACTCGGCGCAGTCCTTCGCCATGATCCGTGGCGGCCACGTCGACCTCACC GTGCTCGGTGCCTTCGAGGTGGACGTGCGCGGCAACATCGCCTCCTGGATGATCCCCGGCAAGCTGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGG CCGGCGCCGAGAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGCTGCTGCCGTACTGCACCCTGCCGCTGACCGGTTGCGGCTG CATTCGCAAGGTGCTCACCGACCTGGCCTACCTGGAGATCGAGGACGGCGCCTTCATCCTCCGCGAGCGCGCCCCTGGGGTCAGCGTCGTGGAGATCGTG GCGAAGACCGCCGGCAAGCTGATCGTCCCCGAGCACGTGCCGGAAATGAGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGCGGCCCGCGCGGCCGGCGCCTCCACGCAAGGCGCCGGCCGCGCGGACCGTCCTTTCCAGAGGGCGTAGGATAGGAGGCTGTCGCACCGTCTACGTC CACCCGCAGCGATTCGGCCCGGCCACGGGCGAATCCAGGAGAACCATCCATGCAAGACGTCGTCATCGTCGCCGCTACCCGTACCGCCGTCGGCAGCTTC CAGGGCTCGCTGGCCGGCATTCCCGCCCCCGAGCTGGGCGCCGCGGTGATCCGCCGCCTGCTCGAACAGACCGGTCTCGATGCCGGCCAGGTCGACGAAG TGATCCTCGGCCAGGTGCTCACCGCCGGGTCCGGGCAGAACCCGGCGCGCCAGGCGGCGATCAAGGCCGGCCTGCCGGTCGGCGTGCCGGCCATGACCCT GAACAAGGTCTGCGGCTCCGGCCTCAAGGCCCTGCACCTGGGCGCCCAGGCGATCCGCTGCGGCGACGCCGAGGTGATCGTCGCCGGCGGCCAGGAGAAC
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Amino Acid Sequence |
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPEGIDVMLQSENGLLGMGAFPSEAEVDADMINAGKQTVTARVGASIFDSAQSFAMIRGGHVDLT VLGAFEVDVRGNIASWMIPGKLVKGMGGAMDLVAGAENIIVTMTHASKDGESKLLPYCTLPLTGCGCIRKVLTDLAYLEIEDGAFILRERAPGVSVVEIV AKTAGKLIVPEHVPEMSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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