Strain | Pseudomonas aeruginosa BL19 genomic scaffold adgeJ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGAAGAGTGACGCCGGCATGCGGTTGCGCCTGATCGCGGTTGGCTCGCGCATGCCTCGCTGGGTCGAGGAAGGCTGGCAGGAATACGTCAAGCGCCT GCCGGCCGAGCTGTCCCTCGAACTGGTGGAGATCCCGCTCAACACCCGCGGCAAGAACGCCGACGTGGCGCGCCTGATCCGTCAGGAAGGCGAGGCCATG CTGGCGCGCGTCCAGCCGGGGGAACGGGTGGTGACCCTGGAGGTCGAAGGTCGGCCCTGGAGCACCGAGCAACTGGCTCGCGAACTGGATCGCTGGCGTC TCGACGCACGCACCGTGAATCTCATGGTCGGCGGCCCGGAAGGGCTGGCGCCGGAGGTCTGCGCGCGCAGCGAGCAGCGCTGGTCGCTGTCGCCGTTGAC GCTGCCGCACCCGTTGGTGCGGATCCTGGTCGGCGAGCAGATCTACCGGGCCTGGACCGTATTGTCCGGGCACCCCTACCACAAATAGTCCCCAGTCCCG
|
|
DNA Sequence for Gene |
>Q073_00284
ATGCCGCAGCCGATCCACCTGAAAGACCACGAGAAAGACGCCCGCCTGGTGCGTCGGCGCGTCATCGTCGGGGCGGTGGCGGTGGTCTTGCTGACCCTGG TGCTGGTGGCGCGCATGTACCACCTGCAGGTGACCCAGTACGAGTACCATTCGACGCTGTCGGAGAACAACCGGGTCCATGTGCAGCCGATCCCGCCGAC CCGCGGGATCATCTTCGACCGCAACGGCGTGATCATCGCCGACAACCGGCCGAGCTTCAGCCTGACCATCACCCGCGAACGCACCGAGGACCTGCAGAAG ACCCTCGACACGCTGGTGGAGATCCTCGGCCTGACCGAGGACGACCGGGCCATCTTCGAGAAGCGCATGAAGCAGGGGCGGCGTCCGTTCGAGCCGGTTC CCATCATGTTCGAACTCAACGAGGAACAGATCGCCCGCATCGCGGTGAACCAGTTCCGCCTGCCGGGCGTCGACGTGGCGACCCAGTTCGTCCGCCACTA CCCGCTGAAGGAGCACTTCGCCCATTCGGTCGGGTACGTCGGGCGGATCAACGAGCAGGAACTGAAGAACCTCGACCCGATCAACTACAGCGGCACCCAC CATATCGGCAAGACCGGCATCGAGCGCTTCTACGAGAGCGAGTTGCACGGCACGGTTGGCTACGAGGAAGTCGAGACCAACGCCCGCGGGCGGGTGCTGC GGGTGCTCAAGCGCACCGACCCGATTCCCGGCAAGGACATCGTCCTGAGCATCGACAGCCGCCTGCAGGAGGCCGCCGAGAACGCCCTGGCCGGGCGGCG GGGCGCCATCGTGGCGATCCAGCCGTCCACCGGCGACGTGCTGGCGATGGTCAGCCAGCCGAGCTACGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTATGCCGAGCTGCGTGACTCCATCGACCGGCCGCTGTACAACCGCGTCCTGCGCGGGCTCTATCCGCCGGGCTCGACGGTGAAGCCGGCGGTGG CGCTGGCCGGCCTCGACGCCGGGGTGGTCACGCCGACCTCGCGGGTCTTCGACCCCGGCTACTACCAGTTGCCCAACTACGACCACAAGTACCGTAACTG GAACCGCTACGGCGATGGCTGGGTGAGCCTGGAGTCGGCGATCTACCGGTCCAACGACACCTATTTCTACGACCTCGCGCACAAGCTGGGGATCGACCGC CTGCACGCCTTCATGAGCCGCTTCGGCTTCGGCCAGAAAGTCGCCCTGGACATGTTCGGCGAAGCCGACGGGCTGATGCCCTCGCGCGAATGGAAGCGCA AGACCCGCCGCCAGGTCTGGTACCCGGGCGAGACCCTGATCCTCGGCATCGGCCAGGGCTACATGCAGGCGACGCCGATCCAACTGGCGCAGATGACCGC GCTGCTGGCCAACAAGGGCCACTGGATCCGCCCGCACCTGGCCAAGACCATCGACGGCCAGCCGCCGGTCGATCCCGACCCGATGCCCGACATCGTGCTG CGCGACCCGGCCAACTGGGACCGCGTCGACTACGGCATGCAGCAGGTGGTGCATGGCGCCCGCGGCACGGCGCGCAAGGTCGGCGCCACCTCGGCCTACC TGATCGCCGGCAAGAGCGGTACCGCCCAGGTGGTGGCGATCAAGCAGAACGAGCGCTACGACCGCTCCAAGCTGCTCGAGCGGCACCGCGACCACGCCCT GTTCGTCGGCTTCGCGCCGGCCAACAACCCGCAGATCGCGGTGGCGGTGATGGTGGAGAACGGCGAGTCCGGCTCCGGCGTCGCCGCCCCGGTGGTCAAG CAGGTGATGGACGCCTGGCTGCTCGACGAGCACGGCAAGCTCAAGGCCGAATACGCGGAACCCGTCGCGCCGCTCGCGGCGGCGGTGGCCAAGCCCGAAC CCACGGCAGCCGAGCCGGAGGCGCCCGCCCTTGAACAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CTTCGACCGCACCCTGTCCAACGAAGACGTGATGCGCCGGCGCGCCAGCCTGCTGCAGCGCCTGCACATCGACGGGATTCTCCTGCTGCTGTTGCTGATC CTCGGCGCCACCGGCCTGTTCGTCCTCTATTCGGCGAGCGGCAAGAGCTGGGACATGCTGATGAAGCAGGCCACCTCGTTCGGCCTGGGACTGGGCATGA TGGTGGTCATCGCCCAGATCGAGCCGCGCTTCATGGCCCGCTGGGTGCCGCTGGGCTACCTGGTGGGGGTCGCGCTGCTGGTGGTGGTCGACGTGATCGG CCACGACGCCAAGGGGGCGACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAGTTCATGAAGCTGCTGATGCCGATGACGGTGGCC TGGTACCTGTCCAAGCGCAACCTGCCGCCGGGGCTCAAGCACATGGTGATCAGCCTGGCGATCATCGTCACCCCGTTCGTGCTGATCCTGAAACAACCCG
|
|
Amino Acid Sequence |
>penicillin-binding protein 2
MPQPIHLKDHEKDARLVRRRVIVGAVAVVLLTLVLVARMYHLQVTQYEYHSTLSENNRVHVQPIPPTRGIIFDRNGVIIADNRPSFSLTITRERTEDLQK TLDTLVEILGLTEDDRAIFEKRMKQGRRPFEPVPIMFELNEEQIARIAVNQFRLPGVDVATQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTH HIGKTGIERFYESELHGTVGYEEVETNARGRVLRVLKRTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPSTGDVLAMVSQPSYDPNLFVTGISF KAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVALAGLDAGVVTPTSRVFDPGYYQLPNYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDLAHKLGIDR LHAFMSRFGFGQKVALDMFGEADGLMPSREWKRKTRRQVWYPGETLILGIGQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPVDPDPMPDIVL RDPANWDRVDYGMQQVVHGARGTARKVGATSAYLIAGKSGTAQVVAIKQNERYDRSKLLERHRDHALFVGFAPANNPQIAVAVMVENGESGSGVAAPVVK QVMDAWLLDEHGKLKAEYAEPVAPLAAAVAKPEPTAAEPEAPALEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|