Pseudomonas aeruginosa BL19, Q073_00200
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL19 genomic scaffold adgeJ-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGTCGGCCAGGGCGCCGACGGTGATCCATCCGGAATGCGAGTGGGCGGACATAGGGTTCTCCTCGTCGTGGGAAACCCATGCTGGCCTGTCTTCGAGT ATCCCGATATCGACCGGATGGTTGATAGGTCGATATGCCACGGAAATAGTACGGAGCGGCGAAGGGAAAGTTATCGAAGATGAAGTCTTAGATGAGTTTT CGTTTCTTCTTTTTTGGTTTTTTAGTTAATGGGTTCCTGTTCTTCTATAAGTATTTTCTGAATTTATTCTTATGTGCTTATTGGCTGTTATCGGAAATGG ACTACATATGTTTTCGTATGATTATTATTTTTAAATCCTGTCTTTCTTTCTAGTATCTGGGTCTGCGTTTATCAGGGCGCAATCTTCGGCTGTCGCGTCG TAATGGTCGGAGGCGCTCTAGGCGGCCGTCCCGGTTGCGCGCAAAGGCTTGGCTACCTTGGCCGGTTCGTACTGCATCGGCTCTCCAGGGAGCAGCCAGG
|
|
| DNA Sequence for Gene |
>Q073_00200
ATGTTCCACAACTCCAAAGGAAATCAGATGAACAAGTTCAAACGTGCAATTCTTGCGCCCCTCGTTGCGTCGGGCACCCTTCTCGCGCTGATGTCCCCCG TGGCCCATGCGGTCGATGGGATCGTCAACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAA CGTCGACCTGGGTATCGTGGCGCCGACCCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGACCTGGTCCTCTCCGGTGCCGGCTGCACC AATGACAAGAAGGTTTCCATCGCCTTCGATACGGTCACCAACGTCGACCGTATCAGCGGCAACCTGATGCTGATGGGGCCGTCGAAAGCCAAGGGCGTGC AGATCCAGATCTTCAACAATTCGGCGGCCAACACCACGAAGATCCCGCTGGGCTTGGTCGAGGCCGCCCCGCAGAAGGCAACCATCGACAAGAACACGGC GACCCTGAAGTACAAGGCCTCCTATGTGTCCACCGAGAAGACCGTGACCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGCGGTCGACGGACGAAGAGGTGAGGCCATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGCCG GAACGGCTCATGCCGGGCTGATCGCACAGGGCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACCTCCGGCACTCC CGTGCTGGCGCAAGCCTGGATCGACGATGGCCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTTCCCTTCAGTGTCACGCCGGCCGTGACGCGAGTGGAC CCCAATGGCGGCGCTGTATTGCGCATCGCCTACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCA GGGACGAAGACGAAAACAATGCATTGCAGTTTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGG
|
|
| Amino Acid Sequence |
>putative fimbrial subunit
MFHNSKGNQMNKFKRAILAPLVASGTLLALMSPVAHAVDGIVNFSGNITDVACDINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCT NDKKVSIAFDTVTNVDRISGNLMLMGPSKAKGVQIQIFNNSAANTTKIPLGLVEAAPQKATIDKNTATLKYKASYVSTEKTVTAGTGLSHIRYLLAYE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|