Strain | Pseudomonas aeruginosa BL20 genomic scaffold adgeI-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGTCTGCCAGTCCTCGATGAGCAGTGCGACGCGCACGCGTGGGTGGGCGCTGGAGAAACCGGCCAGTGCCTCGGGCAACAGCCGTGCGGCGGGGAAGG GACCGCCGCCCAGGCGTAGCTCGCCGCTGTCGAGATTGCCCAGTTGGCTTACCGCGTTGTGCAGTGCGCGATGCCCGGCCAGCAGGCGCCGAGCGTGTTC CAGCACCAGCCGGCCGTGGGCCGTGAGGGCCACGCCGCGGCTGCCGCGCTCCACCAGGGTGCAACCCAACTGTCCCTCCAGCGCCTGGATGCTGCGGGAC AGCGCCGGCTGGCTGAGATTCACCGCTTCGGCGGCGCGGGCATAGTGGCCGTGCTCGGCGAGGGCGACGAAGTGGCGGAACTGGCGTAGATCGCTCATGC GGACTCCGCATCGAATGTGGACCTGGAATGCATTGGAATTATTGTCGTGTCGCTCGGCATAGTGCCAGCCGAACCTCACAACAATAAAACGGAGCATCCG
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DNA Sequence for Gene |
>Q074_04640
ATGAGCCGTCTGCTCGCACTCCTGGCGCTCGCCCCGCTACTCGCCGGCGCCGCCGAACCCTCCGCGTCCAAGCCGCCCAGCGCCTTCACCGTCGAGGCCC AGCGGCGGGTCGAAGCGGAATTGCCCTTCGCCGACCGTGCCGACTTCGAGCGCGCCGAACGCGGCCTGATCCGGCGCCCGGAGCGGGTGCTCATCCGCAA CCCCGACGGCAGCGTCGCCTGGCAGCTCGGCGGCTACGACTTCCTCCTCGACGGCAAGCCCCGCGACAGCATCAATCCCAGCCTGCAACGCCAGGCCCTG CTCAATCTCAAGTACGGCCTGTTCGAGGTTGCCGAGGGTATCTACCAGGTGCGCGGCTTCGACCTGGCCAACATCACCTTCATCCGCGGCGACAGCGGCT GGATCGTGGTCGACACCCTGACCACCCCGGCCACCGCCAGGGCGGCCTACGAGCTGGTCAGCCGCGAGCTGGGCGAGAGGCCGATCCGTACGGTGATCTA CAGCCACGCCCACGCCGATCACTTTGGAGGCGTGCGCGGTCTGGTCGAGCCGCAGCAGGTCGCCAGCGGCGCGGTGCAGATCATCGCTCCGGCCGGCTTC ATGGAGGCGGCGATCAAGGAGAACGTCCTGGCCGGCAACGCCATGATGCGCCGCGCCACCTACCAGTACGGCACGCAACTGCCCAAGGGGCCGCAGGGGC AGGTCGACATGGCCATCGGCAAGGGATTGGCGCGCGGACCGCTGAGCCTGCTGGCGCCGACCCGCCTGATCGAAGGCGAGGGCGAGGACCTGGTGCTGGA CGGCGTGCCGTTCACCTTCCAGAACACGCCGGGCACCGAGTCGCCGGCGGAGATGAACATCTGGCTGCCGCGGCAGAAGGCCCTGCTGATGGCCGAGAAC GTGGTCGGTACCCTGCACAACCTGTACACCCTGCGCGGCGCCGAGGTACGTGATGCGCTGGGCTGGAGCAAGTACATCAACCAGGCGCTGCATCGTTTCG GCAGGCAGGCCGAGGTGATGTTCGCGGTGCACAACTGGCCGCGCTGGGGCAACGCGGAGATCGTCGAGGTGCTGGAGAAGCAGCGCGACCTGTACGGCTA CCTGCACGACCAGACCCTGCACCTGGCCAACCAGGGCGTGACCATCGGCCAGGTGCACAACCGCCTGCGCCTGCCGCCCAGCCTCGACCAGGAATGGTAC GACCGCGGCTACCACGGCTCGGTCAGCCATAACGCACGGGCCGTGCTGAACCGCTACCTGGGCTACTACGACGGCAACCCGGCGACCCTCGACCCGCTCA GCCCGGAGGACTCGGCGGGCCGCTACGTGGAATACATGGGCGGCGCCGAGCGCCTGCTGGAGCAAGCGCGGGCGTCGTACGCCAGGGGCGAGTACCGCTG GGTGGTCGAGGTGGTCAACAGGCTGGTCTTCGCCGAGCCGGATAACCGGGCCGCGCGCGAGCTGCAGGCCGACGCCCTGGAGCAGCTCGGCTACCAGGCG GAGAACGCCGGCTGGCGCAACAGCTACCTCAGCGCCGCCTACGAACTGCGCCACGGCGTACCGCGCGACCAGCCGACGATGAAGGCCGGGAGCGCCGATG CCCTGGCGGCGATGGACACCGGCCTGCTGTTCGACTATCTCGGCGTGCGCCTGGACGCCGGCGCTGCGGAAGGCAAGGCGCTGAGCATCAACCTGCGCCT GCCGGACATCGGCGAAAACTACCTGCTGGAACTGAAGAACTCGCACCTGAACAACCTGCGCGGCGTGCAGAGCGAGGACGCCGGGCAGACCGTGAGCATC GACCGCGCCGATCTCAACCGGCTGCTGCTCAAGGAGGTATCGGCGGTACGCCTGGTCTTCGAGGGCAAACTGAAGAGTTCCGGCAATCCGCTGTTGCTGG GGCAACTGTTCGGCATGCTCGGCGACTTCGACTTCTGGTTCGATATCGTCACGCCGGCGGCGAAGTCCGAAGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGACGAAGGCGCCCGAGAGGGGCGCCTGGTCTTTTCAGTAGGCCACGGTGAAGCGCTGGCGATGATGACGGGGCTGCTCGGCCTCGTCGAGCATGGCTAC CGCCAGGTCTTCCAGGGAAATCCGGCTCTCGCCCTTGGCGTCGAACAGGACCTGGTCGCCGCCGAGGCGGAACTTGCCGCTGCGCTGGCCGGGTTCGAGG AGCATCGCCGGGCTGAGGAACACCCAGTCCAGTCGTTGCTCGCCGCGCAGTTGGTCGAGGGCGTCGGCGGCGCCGAGGGCGCCCTGCTTCCACTGCTCGG GGAATTCCGGGCTGTCCACCAGGCGCTGGCCGGGGGCGATCTCCAGGCTCCCGGCGCCGCCGAGAACCAGCAGGCGCGGCACGCCGGAGCGTTTCACGCC GTCGAGAATGGCCTGGCTGCCGGCGGCGTGGCGGGCGCGGAGGTCGGCGCTGCCCCAGCCGCCGTTGAAAGCGCTGATGACCACCTCGTGGCCTGCCACG
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Amino Acid Sequence |
>putative beta-lactamase
MSRLLALLALAPLLAGAAEPSASKPPSAFTVEAQRRVEAELPFADRADFERAERGLIRRPERVLIRNPDGSVAWQLGGYDFLLDGKPRDSINPSLQRQAL LNLKYGLFEVAEGIYQVRGFDLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGF MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAEN VVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHNWPRWGNAEIVEVLEKQRDLYGYLHDQTLHLANQGVTIGQVHNRLRLPPSLDQEWY DRGYHGSVSHNARAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA ENAGWRNSYLSAAYELRHGVPRDQPTMKAGSADALAAMDTGLLFDYLGVRLDAGAAEGKALSINLRLPDIGENYLLELKNSHLNNLRGVQSEDAGQTVSI DRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGDFDFWFDIVTPAAKSEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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