Pseudomonas aeruginosa PAO1, PA2013 (liuC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAACATCACCGGTTTCATGGTCGGCCAGAAGTACGAGGCTGGCGGCATCGCCAAGCACGGCGCCAAGCTGGTGACCGCGGTGGCCTGCGCGCGGGTGCCG AAGTTCACCGTGCTGATCGGCGGCAGCTTCGGCGCCGGCAACTACGGCATGTGCGGACGCGCCTACGACCCGCGCTTCCTGTGGATGTGGCCGAACGCGA GGATCGGCGTGATGGGCGGCGAACAGGCCGCCGGGGTGCTCGCCCAGGTCAAGCGCGAGCAGGCCGAGCGCGCCGGCCAGCAGCTCGGCGTCGAAGAGGA GGCGAAGATCAAGGCGCCGATCCTCGAGCAGTACGAGCACCAGGGCCATCCCTACTACTCCAGCGCGCGACTGTGGGACGACGGCGTGATCGATCCGGCG CAGACCCGCGAGGTCCTCGCCCTGGCGCTTTCCGCCGCCCTCAACGCCCCCATCGAGCCGACCGCCTTCGGCGTGTTCCGCATGTGACGAGTAGACCAGC
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| DNA Sequence for Gene |
>PA2013
|liuC
ATGAGCGAATTCCAGACCATCCAGCTTGAGATCGACCCGCGCGGCGTAGCCACCCTGTGGCTGGACCGGGCGGAAAAGAACAACGCCTTCAATGCCGTCG TGATCGACGAACTGTTGCAGGCCATCGATCGCGTCGGCAGCGACCCGCAGGTCCGCCTGCTGGTGCTGCGCGGCCGTGGCCGGCACTTCTGCGGCGGTGC CGACCTGGCCTGGATGCAGCAGTCGGTGGACCTCGACTACCAGGGCAACCTGGCCGACGCCCAGCGCATCGCCGAACTCATGACCCATCTCTACAACCTG CCCAAGCCGACCCTGGCGGTGGTCCAGGGCGCGGTGTTCGGCGGCGGGGTCGGCCTGGTCAGTTGCTGCGATATGGCCATCGGCAGCGACGACGCGACCT TCTGCCTGTCCGAGGTACGCATCGGCCTGATCCCGGCGACCATCGCCCCGTTCGTGGTCAAGGCCATCGGCCAGCGCGCCGCGCGGCGCTATTCGCTGAC CGCCGAGCGCTTCGACGGACGCCGCGCCAGCGAACTGGGCCTGCTCAGCGAAAGCTGTCCCGCCGCCGAACTGGAAAGCCAGGCCGAGGCCTGGATCGCC AACCTGCTGCAAAACAGCCCGCGCGCCCTGGTCGCCTGCAAGGCGCTCTACCATGAGGTCGAGGCCGCCGAGCTGAGCCCGGCGCTGCGCCGCTACACCG AGGCGGCCATCGCCCGCATCCGCATCAGCCCGGAAGGCCAGGAAGGCCTGCGCGCCTTCCTGGAGAAACGCACGCCCGCCTGGAGAAACGACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCGGACTACCGCAGCATCCAGCGCCTCCTGGTCGCCAACCGCGGCGAGATCGCCTGCCGGGTGATGCGCAGCGCGCGCGCCCTCGGCATCGGCAGCGT CGCCGTGCACAGCGACATCGACCGCCACGCCCGCCACGTCGCCGAAGCCGACATCGCCGTCGACCTGGGCGGCGCCAAGCCCGCCGACAGCTACCTGCGC GGCGACAGGATCATCGCAGCTGCCCTCGCCAGCGGCGCCCAGGCGATCCACCCCGGCTACGGCTTCCTCTCGGAGAACGCCGACTTCGCCCGCGCCTGCG AGGAAGCCGGCCTGCTCTTCCTCGGACCGCCGGCGGCGGCCATCGACGCCATGGGCAGCAAGTCGGCCGCCAAGGCGCTGATGGAAGAAGCCGGCGTGCC GCTGGTGCCCGGCTATCACGGCGAAGCCCAGGACCTCGAGACTTTCCGCCGGGAAGCCGGGCGCATCGGCTACCCGGTGCTGCTCAAGGCCGCCGCTGGC
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| Amino Acid Sequence |
>putative 3-methylglutaconyl-CoA hydratase
MSEFQTIQLEIDPRGVATLWLDRAEKNNAFNAVVIDELLQAIDRVGSDPQVRLLVLRGRGRHFCGGADLAWMQQSVDLDYQGNLADAQRIAELMTHLYNL PKPTLAVVQGAVFGGGVGLVSCCDMAIGSDDATFCLSEVRIGLIPATIAPFVVKAIGQRAARRYSLTAERFDGRRASELGLLSESCPAAELESQAEAWIA NLLQNSPRALVACKALYHEVEAAELSPALRRYTEAAIARIRISPEGQEGLRAFLEKRTPAWRNDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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