Strain | Pseudomonas aeruginosa BL21 genomic scaffold adgep-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATCGATCGCTACGTGTTTCCCCACGGCGAGCTGCCGCACCTGTCGCTGGCGGTGGCGCGGATGAGCGAAGCCGGGCTGGAAGTAGTCGACGTGGAAAGC CTGCGTCTGCACTACGCCCGGACCCTGGACTTTTGGAGCGCCAACCTGGAAGCCAGGCTGAAGGAGGCGGCTCGCCTGGTGCCCGAGGAAACCCTGCGGA TCTGGCGGCTGTACCTGGCCGGATGTGCCTACGGCTTCAAGCGCGGCTGGATCAACCTGCACCAGATCCTCGCCATTCGCCCCCACGAGGATGGCTCCCA CGAGCTGCCCTGGTCGCGGCGCGACCTGTACGCCTGAACGCCGGCGACCGGCTCCCTTGCGGAGCCGGTCGCGCAATCGGTCCTTGCGGATTGTCCTGCG TGGCGGGGCGGTCTAGTCTGCACGAAGTCCTGCGCGGTCGAGGGAAGCCGGGACGCTTCCGCGACAGCGCGACAACAACGATAAGAACAGGAGACTTCCC
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DNA Sequence for Gene |
>Q075_05820
ATGTCGCTGAGCAGACGCTTCGGTCTTTTCACGCTTGCCGCAACGGTGACCTTCAGTACCGCGGTCTTCGCCGCGCCGACCTTCATCAATATCCTCACCG GCGGCACCAGCGGGGTCTATTACCCCATAGGGGTCGGCCTCTCGCAGATCTACGGGCACGATATCCAGGGCGCGAAAACCTCGGTGCAGGCCACCAAGGC CTCGGTCGAGAACCTCAACCTGCTGCAGGCCGGGCGTGGAGAACTGGCGCTGGCGCTGGGCGACTCGGTCGCCGACGCCTGGAACGGGGTCGCCGACGCC GGCTTCAAGGCGCCGTTGAAAAAGCTGCGGGCTATCGGCAATACCTATCCGAACTATATCCAGGTAGTGGCCAGCCAAGCCTCGGGCATCAAGACCCTGG CCGACCTGAAAGGCAAACGCATTTCGGTGGGCGCGCCCAAGAGCGGTACCGAGCTGAACGCCCGGGCGATCTTCAAGGCCGCCGGCCTGAGCTACGAGGA CATGGGCAAGGTGGAGTACCTGCCCTACGCCGAGTCGGTGGAGCTGATCAAGAACCGCCAGCTCGACGCTACGCTGCAATCCTCCGGCTTGGGCATGGCG GCCATCCGCGACCTGGCCTCGACCATGCCGATCACCTTCGTCGCGATCCCGGCGGACGTGGTGGCGAAGATCGACAGCCCGGCCTACCACGCCGCGAGCA TTCCCGCCGGCACCTACGACGGCCAGGAGCAGGACGTGCCGACGGTGGCGATCGACAATATCCTGGTCAGCCACTCCGGGGTCAGCGACGAGCTGGCCTA CCAGATGACCAAGCTGATGTTCGACAACCTGCCGCGCCTGGTCACCGCCCATGCTGCCGCCAAGGACATCGCCCTGGACAAGGCGGCGAAGAACCTGCCG ATTCCGCTGCATCCCGGCGCCGAGCGCTTCTACAAGGAGAAGGGCGTACTGCCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCCGTTTCTCCGTAGCCCCGGTCCGTGCGGCGGACCGGGTTCCCCGCGTTTCCGGCTGTAGGGAGTCGATGCATGAGCGATCATCAGAACGGGCTGCA CCTCGAGGCGGAAAACTGGCCGCGCGCGCTGTTCGCCGTGGCCCTGGCCTTTTCCGTGTTCCAGGTCGTCACCGCGGCCTTTCCCCTGATTTCCACCCAG GTCCTGCGGGCAATGCACGTCGGACTGCTGTTGCTGGTGGTGTACATCAGCTATCCCGCCTTCGGCATACGTCGCCCCTGGCAGCCGTTGGCCTGGTTGC TGGGCATGGCCGGCCTGGGCACGGCGGTCTACCAGTGGGTTTTCGAGGCCGACCTGATCCAGCGCTCCGGAGAGCTGACCCAGGCCGACATGGTCGTCGG CGTGGTGCTGATCGTCCTGGTCTTCGAGGCGGCGCGACGGGTGATGGGCATCGCCTTGCCGATCATCTGCGCGCTGTTTCTTGCCTATGGCCTGTTCGGC
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Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MSLSRRFGLFTLAATVTFSTAVFAAPTFINILTGGTSGVYYPIGVGLSQIYGHDIQGAKTSVQATKASVENLNLLQAGRGELALALGDSVADAWNGVADA GFKAPLKKLRAIGNTYPNYIQVVASQASGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEYLPYAESVELIKNRQLDATLQSSGLGMA AIRDLASTMPITFVAIPADVVAKIDSPAYHAASIPAGTYDGQEQDVPTVAIDNILVSHSGVSDELAYQMTKLMFDNLPRLVTAHAAAKDIALDKAAKNLP IPLHPGAERFYKEKGVLPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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