Pseudomonas aeruginosa PAO1, PA1951 (fapF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCCGGCAACGGCCAGGTCCTCGGCGGCGCCGGACTGGCGCAGACCCAGGGGGTCAGCCAGAGCATCCGCACCGCCGGCGACCACAACAGCGCCAGCAA TGGCGTCAGCATCGAGGTCCGCCACGGCGAGGCGCCGCCGCCACTGTCGGGCGGCACGCCGCTGGAAGGTGCGCTCGCCCTCAGCGGCGAGACCGGCACG GTCAAGGTCACGCCGAACGGCGGCGCCCTGCAACTGGCGATCCAGGCCAGCGGCCAGGGCGCCAGCCTGCAAAGCCTCGGCGCCGGCGGCCTGGTGCAGA GCGTGGCGCTCAGCGGAAACCGCAACCTGGTGCAGAACCTGGCGGCGCTCGAGGTGATGCTCAAGGACCGGCCGGGCGCCGATCCGGCACTGAATTGCGC CTGGGAGCAATTGCGCGCGCTGCGCCCCAGCGGCTACTGAAAGTTGATCTAGTCTGAAATCACTGTGCTATCGGAAGGCCATAAAAACGGAACGGCAAAC
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| DNA Sequence for Gene |
>PA1951
|fapF
ATGACCCAGACACTCTCGCTGCGAGCTGTCCTCTGCGCCACCACCCTGGTTTCCCCGTTCCTGGCGCAGGCCGCGACGGAATCCGAGGTCGAGGCGCTGA AGAAGGAACTCCTGGAGCTGCGCCAACGCTACGAGGCCCAGCAGAACGCCCTGATGGTCCTCGAACAGCGCGTGCGCCAGGTCGAGGCGCAACCCCAGGC GCCGCAGCCGCAACGCCTGGTCAAGTCGATCCAGCCGCCGGCGCAGGCGCGCAACGACGCCAACGCGGTCGCCGGCACCTACGGCGCCAGCCTCAAGGAC GATGGCGCGCCCGCGCCCAGCGTGGAAAACATCTACCAGGACGCCAGCGGCTTCTTCGGCGGCGGCACCTTCAGCCTGGAGACCGGCCTCACCTACAGCC ACTACGACACCCGCCAGTTGTTCCTCAACGGCTTCCTGGCGCTGGACTCGATCTTCCTCGGCAACATCGGCGTGGACCAGATCGATGCCGACATCTGGAC CCTCGACCTGACCGGCCGCTACAACTGGAACCAGCGCTGGCAGGTGGATATCAACGCCCCGGTGGTCTATCGCGAATCGACCTACCAGTCCGCCGGCGCC GGCGGCTCGACCTCGCAGATCACCGAGAAATCGGTGACCGGCGACCCACGCCTGGGCGACGTCAGCTTCGGCGTCGCCTACAAGTTCCTCGACGAAAGCG AGAGCACCCCGGACGCGGTGGTCAGCCTGCGGGTCAAGGCGCCCACCGGCAAGGATCCCTACGGCATCAAGCTGAAGCAGGTACCGGGCAACAACAACCT CAACGTGCCCGACGACCTGCCCACCGGCAACGGCGTCTGGTCGATCACCCCGGGCATCTCGCTGGTGAAGACGGTGGACCCGGCGGTGCTGTTCGGCAGC CTGTCGTATACCTACAACTTCGAAGAGTCGTTCGACGACATCAACCCGCAGCAAGGCGTGAAGACCGGCGGCAAGGTCAAGCTCGGCAACTGGTTCCAAC TCGGCGTCGGCGTGGCCTTCGCGCTGAACGAGAAGATGAGCATGTCGTTCTCCTTCTCCGAACTGATCAGCCAGAAGAGCAAGGTCAAGCAGGACGGCCA GAGCTGGCAGACCGTCAGCGGCAGCGACGCCAACGCCGGCTACTTCGGCCTGGGCATGACCTATGCGGTGAGCAACAGGTTCAGCATCGTGCCCAGCCTG TCCATCGGCATCACTCCGGACGCGCCGGACTTCACCTTCGGCGTGAAATTCCCCTACTACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCCACCGTTCGAGCCTGGGCATGCCTTACCCCTCGAAGGGATGCGTGAGCCTGGGAGCGATCCTCGCCTAGCTGCGCAGGGCGGATAACGCCGCAGG CGTTATCCGCCGGTAGCAACGGCACCGTCCCTCTCAAGCCTCGCCAACGAGCGCCCGCTCGACTTCCTCGCGCGAGGGGATCGAGGTCTGCGCGCCGAGG CGGGTCACCGAGATCGCCGCGGCGGCCTGGCCGAAGCGGATCGCCGCCGCCTCGTCGAGGCCGCGCGCAAGGGCCGCGGCGAAGCCGCCGACGAAGGTGT CGCCGGCCGCCGTGGTATCCAGCGCCTTGACCCGCGCCACCGGGAAATGCTCGACCCGCCCCTCGCCTACCAGCAGGGCGCCCTGGGCGCCGAGGGTGAC GATCACCCTGCCGGCGCCCATTTCGCGCAGGCGCTCGGCGGCACGCCCGGCGCTCTCCAGGGAGTCCACCGGCAGGCGGCAGAGCAGTTCGCTTTCGGTC
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| Amino Acid Sequence |
>FapF
MTQTLSLRAVLCATTLVSPFLAQAATESEVEALKKELLELRQRYEAQQNALMVLEQRVRQVEAQPQAPQPQRLVKSIQPPAQARNDANAVAGTYGASLKD DGAPAPSVENIYQDASGFFGGGTFSLETGLTYSHYDTRQLFLNGFLALDSIFLGNIGVDQIDADIWTLDLTGRYNWNQRWQVDINAPVVYRESTYQSAGA GGSTSQITEKSVTGDPRLGDVSFGVAYKFLDESESTPDAVVSLRVKAPTGKDPYGIKLKQVPGNNNLNVPDDLPTGNGVWSITPGISLVKTVDPAVLFGS LSYTYNFEESFDDINPQQGVKTGGKVKLGNWFQLGVGVAFALNEKMSMSFSFSELISQKSKVKQDGQSWQTVSGSDANAGYFGLGMTYAVSNRFSIVPSL SIGITPDAPDFTFGVKFPYYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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