Strain | Pseudomonas aeruginosa BL21 genomic scaffold adgep-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGGCCTGATGCAACCCTGGCGCTTCATCCGTATCACCGAGCCGGCGTTGCGCCGGGCCATCCACGGGCTGGTCGAGGAGGAACGCGGACGTACCGCCG AAGCCCTCGGCGAGCGCTCCGACGAGTTCATGCGGCTCAAGGTCGAGGGCGTGCTGGATTGCGCCGAACTGCTGGTCGCCGCCCTGATGGACGACCGCGA ACGCCATGTGTTCGGTCGCCGGACCCTGCCGCAGATGGACCTGGCGTCGCTCGCCTGCGCGATCCAGAACCTCTGGCTGGCCAGTCGCGCCGAGGGCCTG GGGATGGGCTGGGTGTCGCTGTTCGATCCGGCCGCGCTGGGCGAGCTGCTCGGCCTGCCGCCTGGCAGCGAAGCGGTGGCGGTGCTCTGCCTGGGCCCGG TGGCGGAGTTCTACCCGGCGCCGATGCTGGCGCTGGAGGGTTGGAGCGAACCGCGTCCGCTGGCCGAGCTGGTCTACCAGAACCGTTGGGGCGCGCGAGC
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DNA Sequence for Gene |
>Q075_04176
ATGAGCGCACTGCTGGGTATCCTCGGCGTGGCGCTGGATGCGCGCTTCGGCGAGCCGCAGGGCTGGCACCCGCTGGTCGCCTTCGGCCGCCTGGCCGATC GCCTGGAGCGCCGTTTCAACCGCTCGCGCCTGGCCGGCGAGGGCGATCCCGGGGTCGGCTGGCGCAGCCACGGGGTGACCGCTTGGGTCCTCGCGGTACT GCCGCTGACCCTGCTGGCCTGGGCGCTCGCTGAACTTCCCTACCTCGGCTGGCTGGTCCAGGCCCTGGCGCTGTACGCCGCGCTCGGCCTGCGCAGCCTC GGCGAGCACGCCGAACCGGTGGCGCTGGCCTTGCGCGCCGGCGACCTGGACGAGGCGCGGCGACGTGTCGGCTACCTGGTCAGCCGCGATACCCGCGAAC TGGACCAGGCCGGGGTCGCCCGCGCGGCCACCGAATCGGTACTGGAGAACGGCAGCGACGCGGTCTACGCCGCGCTGTTCTGGTTCGCCGTGGCCGGCGC GCCGGGGGTGGTGCTGTATCGCCTGAGCAATACCCTGGACGCGATGTGGGGCTACCGCAACGCGCGCTTCGAGCGCTTCGGCTGGGCCGCGGCGAAGATC GACGACATCCTCAACTACCTGCCGGCGCGGCTGGTGGCGCTGACCTACGCGCTGCTCGGCGGCACCCGCCAGGCCCTGCGCTGCTGGCGCGAGCAGGCGC CGCAATGGGACAGCCCCAACGCCGGCCCGGTGATGGCCGCCGGCGCCGGTGCGCTGGGCGTGTCCCTGGGCGGCGCGGCGATCTACCACGGCGAGCTGCA CCAGCGGCCGCTCCTCGGCAGCGGCCCGCAGCCGCAGGGCCGCGACATCTATCGGGCCCTGGCGCTGGTGCGCCAGGGCGTGCTGCTCTGGCTGCTGGTG CTGGCCGGACTCTGGGCCATGGGGTGGCTGCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACACGGAGGGCGGTTGCGCGAGGCGGCGCGCCGCTACGACATTCCGCTGGCGGACTGGCTGGACCTGTCCACCGGCATCGCGCCCTGGCCGTTTCCGCTG CCGGCGATCCCCGAGCAGGCCTGGACCCGCCTGCCGGAGAGCGACGACGGCCTGGAAGCCGCCGCCTGCCTCTACTACGGCGCCGAACGGGTATTGCCGC TGGCCGGCAGCCAGGCGGCGATCCAGGCCCTGCCAAGGTTGCGGCGGGGCGGGCGGGTCGGCGTCCTGTCGCCGTGCTATGCCGAGCACGCCCACGCCTG GCGCCAGGCCGGGCACCTGGTGCGGGAGATCGGCGAGGCCGAGGTCGAGCCCTATCTCGACAGCCTCGACGTGCTGCTGGTGGTCAACCCGAACAACCCC ACCGGGCGGGTCTTCGAGCCCGCCGAGCTGCTGGCCTGGCATGCCCGCCTGCAACGTCGCGGCGGCTGGCTGCTGGTCGACGAGGCGTTCATGGACTGCA
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Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSALLGILGVALDARFGEPQGWHPLVAFGRLADRLERRFNRSRLAGEGDPGVGWRSHGVTAWVLAVLPLTLLAWALAELPYLGWLVQALALYAALGLRSL GEHAEPVALALRAGDLDEARRRVGYLVSRDTRELDQAGVARAATESVLENGSDAVYAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAAKI DDILNYLPARLVALTYALLGGTRQALRCWREQAPQWDSPNAGPVMAAGAGALGVSLGGAAIYHGELHQRPLLGSGPQPQGRDIYRALALVRQGVLLWLLV LAGLWAMGWLHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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