Strain | Pseudomonas aeruginosa BL21 genomic scaffold adgep-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGCAGCGCCGGACAGGCGCCCGCGGCCAGCCTTGACCAGATCCAACTGGCCCGGTCCGTCCTTGTCCACCTCGTTGCCGGTGGTGCCGAAGTCCAGCG GCACGGTGATCCGGCTGTCGAAGGAGAGGATGCGTTCGTGCAACTCCTCTGCGTGTTGTATGACCTTGCGCGGGTAGCCGGCGCTGCCCAGCCACTGGGT CCAGGCCAGCCAGCCGCCGATGGCCAGCAGGACGATGAGCAGTGGCAGGCCGAGGTAAAGCGCCGTTCTTTTGCGAGTTCTAGTCATTGCCGTCCCAGTC AGGTTCGAAATCGGTGGACGCCGGTCGTTCCGCATTGCAGAGCGGGGCACCTGTCAGGGTGGGACGAGGGCAGGGACGGAAAATTTAGCGGGCCGACGAA TTCGCCGGGTGCCGCCAGCGACGCCGGCTCCGGTAAATTTGCCGATGGACGGAACGTTCTAGCTGGATAAAGCGAGCTTCATGGCTGAACAGGTAGGACG
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DNA Sequence for Gene |
>Q075_02975
ATGACGGTTTCTCGACGCGGATTCATGGCGGGTTTGGCGCTCACCGGAGCGGCTGCCCTGCCGGTGGCTTACTACACACATCGTCATCTGGTCCGCCTGC GCGAAGACGAGGAGCACCCGGCCACGCCCGGCGAAGCGACGCTGGACCTGGCCGCCACCGAGGCCATGCGCCTGGGCGACCGCCTGCGCGGTATCTGGGA CCTGCGCCTGCTCGGCGCCGACGCCGGCCTGCCGGGGTTACCGCTGGAGGGGTTGGAGCTGGTGCTCGACGTGGCGCCCAGGGGGCTGGGCCTGATCGGA TACCTGGATACTCCGGAGCGCCTGAGAGGGCCGCAGGAACCGCGCTTCCGCCTGCTTGGCGACCTGGTCGGTGCGCGCTCCGCGCGCATCCGCTGGCGCC TGGTGGACGGCAACACCGCATCGATGACCCCGAGCTACGATTGCTCGGCGGTCTTCGACGAGGTCTGGGACAATCTGGCCAATGCCGGCGACGGCACCCT CAGCGGTCGCATCGAGCGCCTCGAGCGCTCGCCACTGCAAGCGCAGGAGGATTTCCGCTTCGTGGCGGTCAAGCGCCCGTTTCCGCTGGCTCGCGAGCGC ATCGGCCTCAACGAGCGCTTGCTCGCCTGGCTGATCTCGCCGCAGCATCGCCTCTTCCACCAGCTCTGGCATGCCTCGCGGGACAAGTGGCATCGGCTTT CCGAGAAGCAGCGCAACGCCCTGCGCGGCGTCGGCTGGCAGCCCGGCCCACTGGACCGCGAACGTGACGCCCGTGGTCGTCACAAGGACCGCAATGCTTC CGGTATCGACTTCTTCTTCATGCACCGGCACATGCTGCATACCGCGCGCTCGATGCAGGACCTGCCGTCCTGGCGGCGCCTGCCGCTGCCGGGCGTACCG CTGGCCCACGACCGGGTCGGCTTCCTGCGCTACTTCGACAACCCTGACGGCTGTTCCGTCCCGCCGGCCTGGGTCGCGGTGGACGACGACGAATACACCG AGTGGCTGCGTGGGCTGAAAAGCGACGAGGGCTATCACGCCAATTTCCTGGTCTGGGAGTCGCAATACCAGGACCCGGAATACCTGGCGAAACTGACGCT CGGTCAGTTCGGCTCGGAGATGGAGCTGGGCATGCACGACTGGCTGCATATGCGCTGGGCTTCGGTGACTCGCGATCCTTCCAACGGCGCGCCGGTGATG AGCGACCGGGTACCATCGGACTTTTCCCCGCGCTGGTTCCGCCCGGAGAACGACTTCCTCGGCGACCCGTTTTCCTCCCATGTGAACCCGGTGTTCTGGT CGTTCCACGGCTGGATCGACGACCGCATCGAGGACTGGTATCGCGCCCACGAGCGTTTCCATCCTGGCGAAGTGCAGCGCCGCGAAGTGGAGGGCATCCA ATGGTTCGCGCCCGGTCGATGGGTCGAGGTCGGCGATCCCTGGCTGGGTCCGGCGACCCATGGATGCGGGCTTTCGGATGTCCAGGCGAGCAGCAACTCG GTGGAGCTGGACGTGGAAACCATGAAGCTGGCTTTGCGCATCATCTTCAGCGAAGAAGATCAACTGAGCGGCTGGCTCAAGCGTGCGCCGCGGCGGCCCT GGTACGCGCGCAACCTGAAGCTGGCGCGCGACCAGCTCAGGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGCGAAAGAGCGAGTAAGTATGGAGGAGGCCCGCGCAACGCGGGCCTCAGTCTTTCCGCGCGAGACCCGGGCGGTCGCTCTGCCAGCCGCCGCCGAGG GCCTTGTACAGGCCGACCGAGGCCTGCAGGCGGGCCAGTCGCAGTTGCACGGCGGCATCCTGCGCCGCGTACAGCGTGCGTTGCGTTTCGAGGACCGTCA GCAGGGTTTCCGCGCCGGCCTGGTAGCGGCTGTCGGAGAGATCGAAGGCGCGCTGCGCCTGCTCCAGCTCCTGCTGCTGCCAGTGCAGCTGGCGGTCGAG GCCGTCGATGCTGTTCAGCGAGCGTTCGGTGTCGGCAAAGGCGGTGAGGATCGCCTTGCGGTAGGTTTCCAGCAGTTCTTCCTGGCGCGCCAGGCTGCGG TCGCGCTCGGCGCGCAGGCGGCCGTGGTTGAAGATCGGGGCGAGCAGGTTGGCGCCCAGGTTGTAATAGGGGTTGCGGAAAGTGTCGGCGGCGCGGTTGG
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Amino Acid Sequence |
>protein PvdP
MTVSRRGFMAGLALTGAAALPVAYYTHRHLVRLREDEEHPATPGEATLDLAATEAMRLGDRLRGIWDLRLLGADAGLPGLPLEGLELVLDVAPRGLGLIG YLDTPERLRGPQEPRFRLLGDLVGARSARIRWRLVDGNTASMTPSYDCSAVFDEVWDNLANAGDGTLSGRIERLERSPLQAQEDFRFVAVKRPFPLARER IGLNERLLAWLISPQHRLFHQLWHASRDKWHRLSEKQRNALRGVGWQPGPLDRERDARGRHKDRNASGIDFFFMHRHMLHTARSMQDLPSWRRLPLPGVP LAHDRVGFLRYFDNPDGCSVPPAWVAVDDDEYTEWLRGLKSDEGYHANFLVWESQYQDPEYLAKLTLGQFGSEMELGMHDWLHMRWASVTRDPSNGAPVM SDRVPSDFSPRWFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFHPGEVQRREVEGIQWFAPGRWVEVGDPWLGPATHGCGLSDVQASSNS VELDVETMKLALRIIFSEEDQLSGWLKRAPRRPWYARNLKLARDQLRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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