Strain | Pseudomonas aeruginosa BL22 genomic scaffold adgff-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCGAGCAACTCGCGGGCGCTCTGCCAGACCAGCTCGGGAGTCGGCAGCACCTGGGCCGACATCCAGTGGCGATGGCTGGCGACCCACCACAGCAGC GCCAGCCCGAGCGGCAGCAACCAGGGCAGCAGGCTGTCCCCCAGGCGCCGGGCGAAAGCCGCGGAGGGCGGCGGCGCCAGGCGCGGCAGGGGCCGGCTCC AGGCGGGCGAAAGGGTTTTATCGATATTCTTCATGGGAATATAAATCGCCACATCAATGCGTTTTTTCGCTAAGAAGGGTCATTTAAAGAAAGGCGCCAG GCAGCGGCAAATGCATTTGGAGAATATTTTCCATGCTCTGGCTGCATATGACGCGGAGAGGCCCGTGCGGCCTGTCATACTGCTTATGGTTATAAAAAAA TGAATTTTTATTATTTATTTTCGAGGCGCCGCTGTGCATAGCTAGCCGCTCACCCGCTCCCGGCGGGAATCCCTCTCTTCCCGTTCCAAGGAGCCGCCCC
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DNA Sequence for Gene |
>Q076_04840
ATGAAAGCGCTTACGTCTTCCCTGCTCGGTCTGTTCGCCGTGCCTGTCCTCGCCGGCCTGCTCGGTGCCTACGTGCCGCTGGCGAGCGCCGCTCCGCCGA AGGAAATCCGCATCGCGGTGCCGGACGTCAGCGCCGGCAGCTCGCACTCGGGTGGCGGCGTGGTCGACGTGCTCTACACCCGGCAGTTGCTGGAGAAGGA GTTCGCCAACGACGGCATCGCGGTGAAATGGAGCTTCTTCAAGGGCGCCGGTCCGGTGGTCAACGAAGCGTTCGCCAATGGCCAGGTGGACTTCGCCTAC CTCGGCGACCTGGCGGCGATCATCGGCAAGTCCGGAGGCCTGGACAGCCGTCTGCTGGCCGCTACCGCGCGAGGGGTCAACCACTATCTCGGCGTGCAGC CGGGGTCCGGGATCAAGACCCTGGAGGATCTCAAGGGCAAGCGCGTAGGCATCTTTCGTGGCACCGCCAGCCAGTTGTCGTTCGACAATGCCCTGGCCAG CGTCGGTCTCAGCGAGAAGGACCTGAAGGTGATCAACCTCGACTTCAGCGCCGCCCTGTCCGCCCTCGCAGCCAGGCAGATCGATGCCACCTGGGGCCTG GCCGGGCTGTTCGCCCTGCGCGACCGCGGGCTCGCGGAAATTCCGCTGAGCACCCGCGACCTGAACGGCGCCGGCACCCTGCAGGCGCTGCTGGTCGGCT CCGGAGCCTTCGTCGATGCCCATCCGGACATCACCGAGCGGCTGCTCAAGGTGCAGTTGCAGGCCCAGGACTGGCTGGCCCGCGAGGAGAACCGCGACGC CTACATCGAACTGGTGTCGAAGCAGGCCAGCTACCCGGTGGTGATCCTGCAGAGCGAGTACCGTGGCCGCAAGCTGGGCGACGCCCTGTCGCCGCGCCTA GACGCCGATTTCCTTGGCCGGCTGGATGCTTCGATCCAGGCGGCCAAGCGTTTCGGCCTGATCCGTCGCGAATTCAGCGCCGAGCAGTGGGCCGCGCCGG AACTGCTGGAAGCGGCCGGCAAGCTGGCGAAGGCCAAGGCCAAGGCCGTGGCGCAAGCGGCGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGCGCCGCGGCCCGGGGTGTCACCAGATCGAGCGGGAGTAATCGACGACCAGCCGGGTTTCGTCGATGTCGCCGTCGAGATAGCTCGCGTTGCCCCG GTGCCAGGCCTGCGAGGTGCGCAGCGCGAGGCCGGCGAGGGGGCCCGCCTTGACCCGATAGGCGAAGCCGAGGTCGCTTTCCCGGTGCCGCCCGTCACGC CCGTAGAGTCCGGCGTAGATGCTCTTGGCGGCACTGCTGGCGCTGGCCCCGGCACGGCCGCGGGCATGCAACGCATGCAGGCTGAGCCCAGGCAGGCCGA GCGCGCCGAGGTCCAGGTCATAGCGTAATTGCCAGGAACGCTCGCCCGGTCCGTTGAAGTCGGAGTAGCCCACCGAGTTGGCCAGTACCATGGACGCGCT GGAGCGCCCGTCGCCGAAGGCCATGTAGTCGAACGGCTGCTCGCCATGGACACGCTGGTAGGCCAGGGTGATGCGCTGCGGCCCCTGTTCGTAGCCCAGG
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Amino Acid Sequence |
>nitrate ABC transporter substrate-binding protein
MKALTSSLLGLFAVPVLAGLLGAYVPLASAAPPKEIRIAVPDVSAGSSHSGGGVVDVLYTRQLLEKEFANDGIAVKWSFFKGAGPVVNEAFANGQVDFAY LGDLAAIIGKSGGLDSRLLAATARGVNHYLGVQPGSGIKTLEDLKGKRVGIFRGTASQLSFDNALASVGLSEKDLKVINLDFSAALSALAARQIDATWGL AGLFALRDRGLAEIPLSTRDLNGAGTLQALLVGSGAFVDAHPDITERLLKVQLQAQDWLAREENRDAYIELVSKQASYPVVILQSEYRGRKLGDALSPRL DADFLGRLDASIQAAKRFGLIRREFSAEQWAAPELLEAAGKLAKAKAKAVAQAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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