Strain | Pseudomonas aeruginosa BL22 genomic scaffold adgff-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAGTACGCCCTGCACCAGGCGCTCGGCGACTTCCTCGAAGGCCGCACCACATTGATCGTGGCTCATCGGCTGTCTGCGGTGAAGCAGGCCGACCGGGT CCTGGTCTTCGATGGCGGGCATATCGCCGAAGACGGCGACCACCAGCAACTGATCGCCGAAGGCGGCCTCTACGCCCGGCTCTACGGACATCTGCAACAG ATGTGAGGCGCCAGGCTGTCGCCTGGCGGTTTTTCTCGTATATTCCATATAAGACATCCGGTTTTTATTGGCTGCGGCAATAAAAAACGCTGTCTGTTCC GCCAGGTGCAGGGCAGGTTCGGCAAACAGCCACTAGACTCCTACTGTTTGCCGGGTGTCCGCCTCCTCCAGCGTCGTGGCTGCCGGCAGGCAAGGCCTCG GGAGTTCTGCGACGGGATCTTGAGCGGCCGACAGGTGATGCAGTCAGGGGTGACGGAGACGGCACCCGATCGCTTAGCGCCAGTTTGAATGGTAGATGGA
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DNA Sequence for Gene |
>Q076_03371
ATGAGGCAGAACCGGACTCTCGACAAGCCCCGCCTGCTCGGCCTGGTATGGCCCTTCATCGTCGTGGTGCTGTTGCAGGCCATGCTGGCGGGCGGCAGTC TCTACGTCCTCTCCGCGGTGCGCAGCTATGTCGGCGGCGAAAGCCTCTGGTCGAAGGGCCAGAAGGATGCCATCTACTATCTCACCCTCTATGCCGACTC ACGCGCCGACGAAGACTTCCGCCGCTACGAGGAGGCCATCGCGATCCCCCTCGGCGACCGCGAGATGCGCCTTGCCCTGGACCAGCCCGACCCGGACATC GAGGCGGCCCGCCAGGGCATCCTCAAGGGCGGCAACCATGCCGACGACGTTACCGCGATCATCTGGCTGTACCGCAACTTCCACGACTTCAGTTACTTCG AGCGCGCCATCGAGCTGTGGCTGGTGGGCGACAAGTACGTCATGGAACTGATCGACGTCGCCGGCAAGATGCGCGCGGGCATCGGCACCGGGCAGGCCAG TGCCGAGCAGGTGCAACAGTGGAAGACCGAGATCCACGCGATCAACGAGAAGGTCACGCCGGCGGCCAAGGCCTTCAGCGACGCCCTCGGCGAGGGCTCG CGGGCCTTGCTCAGGCTGCTGGTGGCCAACCTGACCACCGCCAGCGTGCTCATCCTCCTGGCGTTCCTGCGTACCCGGCAGCAACTGATGCAGCGCCAGG AAGTGGAGAACGCCCTCGATGCCGAGCGCGAACGGGCCCAGATCACTCTGGCCTCGATCGGCGACGGAGTGATCACCGCCGACACCCAGGGGGGCATTTC CTACCTCAACCCGGCCGCCGAGCAGATGACCAACTGGACGCTGGACAAGGCCCGCGGCCTGCCCCTGGCGTCGCTGTTCCGGATCGTCGACGAAAGCTCG CGGGAGGAGGGCATGCTGCTGATCGAGCAGATCCTCAGCGGCGAGATCGACGGCGGCCGCGAGCATTCCAAGCTGGTCCTGCGCCACGACGGCAGCAGCG TGCCGGTGACCCTGGTGGGTGCACCGATCCATCGCGGCGGCGAGATCACCGGGGTGGTCCTGGTGCTTCACGACATGACCCGCGAGCGCCAGTACATGGC GCGCCTGTCCTGGCAGGCGACCCACGATGCGTTGACCGGGCTGACCAACCGCCGCGAGTTCGAGTATCGCCTGCAGATAGCGCTGGAACGCCTGGAGCGC AACAGCGGGCGGCACGCCCTGATGTTCCTCGACCTGGACCAGTTCAAGCTGGTCAACGACACCTGCGGCCACGCCGCCGGCGACGAACTGCTGCGCCAGG TCTGCACCCTGCTGCAACAAGGCTTGCGCGAGGGCGACACGCTGGCGCGGCTGGGCGGCGACGAGTTCGGCATCCTGCTGGAGAACTGCCCGGCGGAAAA AGCCGTGGAGATCGCCGACCATCTGCGCAAGACGGTCCAGGACCTGCACTTCACCTGGAGCGGGCAGCCGTTCAACTGCACCGTCAGCGTCGGCCTGGTG CACCTGCTGCCGGGTATCTCGACCCTCGAGGAGGCACTGCGCTCCGCCGACATGGCCTGCTACATGGCCAAGGAAAAGGGGCGCAATCGGGTCCAGGTGT TCCATCAGGACGACGTCGAACTGTCGATGCGCTTCGGCGAGATGACCTGGGTCCAGCGCATCCACCTGGCGCTGGAGGAAGACCGCTTCAGCCTCTATGC CCAGCCCATCGTGCCGCTGGGCGAAGGCGCGGAGGAGGGCTTGCACGTCGAACTGCTGCTGCGCCTGCGCGACGAGGGCGGGCGCCTGGTGCCGCCGCTG AGCTTCATACCCGCCGCCGAGCGCTACGGCCTGATGACGCTGATCGATCGCTGGGTGGTGGAGAATGCCTTCCGCACCCTCGTCGAGCGCGCCCAGGACC CTCGCGCCGAGCCGATCGGCACCTGCGCCATCAACCTCTCCGGCGCGACCATCGGCGACGAGTCGTTCCTGCAGTTCCTCACCGAGCTGTTCGCCCGTTA CCGCATTCCGCCGCAGACGATCTGCTTCGAGGTCACCGAAACCGTGGCGGTTGCCAACCTGGCCAGCGCCATCCGCTTCATCAACGAGCTCAAGGACACC GGTTGTCGTTTCTCCCTGGACGATTTCTGCGCCGGCATGTCGTCCTTCATCTACCTCAAGCACCTGCCGGTGGATTACCTGAAGATCGATGGCAGCTTCG TCAAGGACATGCTCGAGGATCCCATCGATCGCGCCATGGTCCAGGTGATCAACCATATCGGCCACGTGATGGGCAAACGTACCATCGCCGAGTTCGTCGA GACCGTCGAAGTGATGGAGGCGCTGCGCGAGATCGGCATCGACTATGCCCAGGGCCTGGCCATCGGCGCGCCCCTGCCGTTCAGTCGCCAGCCTCCGGGC GCAGGGCTGGATGCCCAGGGCCTGTGGCCGAGCCTCGGACAGAACCTCCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGACCGCGGAGCGAAGAAAGAGTAGTTTCGCTGCTATGAGGCCGTTGCCGAGAAGAAGAGAAGGGAGACGGGTGTGAGCGAGTTCTTTGACCGTACGGG CCCCTTGCAGGAGGCGGGAAGCTATCCGCAGTGGGCGCAGCAACTGATCGTCGACTGCCAGGCGAGCAAGGACCGGGTTTCCGGCCACGAGCTGTACCGG CGCATGCGCGACGCCGAGCTGAGCCCGGCGCTGATGCGCCTGTACCTGATCGGCGGCTGGCCGGTGGTCGAGCAGTTCCCCTTGTACATGTCGCAGAACC TGCTGAAGACCCGTTTCGCCCGCCATCCCGGCGAAGACATGGCGCGCCGCTGGCTGATGCGCAATATTCGGGTCGAACTCAACCACGCCGACTACTGGCT GCACTGGGCCGAGGCCCACGGCGTGAGCCTGGCCGAGATCCAGGCGCAAGACGTGCCGGCCGAACTGCACGCGCTCAGCCACTGGTGCTGGCACACCTGC
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Amino Acid Sequence |
>membrane protein
MRQNRTLDKPRLLGLVWPFIVVVLLQAMLAGGSLYVLSAVRSYVGGESLWSKGQKDAIYYLTLYADSRADEDFRRYEEAIAIPLGDREMRLALDQPDPDI EAARQGILKGGNHADDVTAIIWLYRNFHDFSYFERAIELWLVGDKYVMELIDVAGKMRAGIGTGQASAEQVQQWKTEIHAINEKVTPAAKAFSDALGEGS RALLRLLVANLTTASVLILLAFLRTRQQLMQRQEVENALDAERERAQITLASIGDGVITADTQGGISYLNPAAEQMTNWTLDKARGLPLASLFRIVDESS REEGMLLIEQILSGEIDGGREHSKLVLRHDGSSVPVTLVGAPIHRGGEITGVVLVLHDMTRERQYMARLSWQATHDALTGLTNRREFEYRLQIALERLER NSGRHALMFLDLDQFKLVNDTCGHAAGDELLRQVCTLLQQGLREGDTLARLGGDEFGILLENCPAEKAVEIADHLRKTVQDLHFTWSGQPFNCTVSVGLV HLLPGISTLEEALRSADMACYMAKEKGRNRVQVFHQDDVELSMRFGEMTWVQRIHLALEEDRFSLYAQPIVPLGEGAEEGLHVELLLRLRDEGGRLVPPL SFIPAAERYGLMTLIDRWVVENAFRTLVERAQDPRAEPIGTCAINLSGATIGDESFLQFLTELFARYRIPPQTICFEVTETVAVANLASAIRFINELKDT GCRFSLDDFCAGMSSFIYLKHLPVDYLKIDGSFVKDMLEDPIDRAMVQVINHIGHVMGKRTIAEFVETVEVMEALREIGIDYAQGLAIGAPLPFSRQPPG AGLDAQGLWPSLGQNLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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