Strain | Pseudomonas aeruginosa BL23 genomic scaffold adgfb-supercont1.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGCAGGCCTTGCAGTTGCTCGACCACGCGCGGCAGGTCGGCCAGGTGGTCGCGCTCGATCTCGATCAGGCGCAGCCCGGCGCCGGCCAGCTCGGCCAG CAGCGCACGAACCAGGGAGGACTTGCCGGTCCCGCGGGCCCCCCAGAGCAAGGCGTGGTTGGCCGGCTGGCCGGCGACGAACTGGCGGGTGTTGCGTTCC AGTTGCTCGCGCTGCCGCTCTACGCCCAGCAGGTCGGCCAGGCGCAGGTCGAGGCTGACCTCCAGCGGCTGCAGGTAGCCGCTACGGCCGTCGCGGTGCC AGCGCGCCGCCAGGCTGCGCTCCCAGTCGACGGCTTCGCGTACGGCCGGCAGCAGCGGCTCCAGGCGCGCGAGCACGCTTTCGGCGCGGGCAAGAAAATC GCTCAATCGGGAATCCACTCTGTTCTCCTCGGATCGGACTGACGTCACGGATCGATCATCGGTTGCGCCCAGGAACCCCGACAGACGGTCGGGATGGGCT
|
|
DNA Sequence for Gene |
>Q077_05703
ATGCTAGGCGGCAGAACCTCGCCAAGGCTGATCCCCGCCCCCATGGATATAGCGCTGACTCATCGCCTGTCGTTCAAACAGGCCAGCCTCACCGTGCTGG TGGCCTTTATCCTGGGAACCCTGCTCAGCCTGATTCAGGTTGGCGTCGATTATGCCAGCCAGGACGCATCCATCAATCGCGAAGTGCGCGCGCTGCTGGA CGTCAGCCACAACCCCGCCGCGCGAATCGCCTACAACATCGATGCGGAGCTGGCCCAGGAGCTGGTCCTCGGCCTGCTGCGCTCGCCCGCCGTGGTCCGC GCGGAAATCATCGACACCTCCGGCCTGCCGCTGGCCAGCGCCTCGCGCGAACCCGCCGAAAGCCGCCTGCGGCCGCTCAGCGACTTCCTCTTCGGCCACA AGCGGGTCTACGAGGACCCGTTGCATGTCGACCATGCGCCGGGCGAGGCCCTCGGCGTACTGCACCTGGAAATCGACACCTTCGTGTTCGGCAACGACTT CCTCCGTCGCGCCGGCATCACCCTGCTCTCCGGCTTCGTGCGCAGCCTGCTGCTGTCGCTGATCCTGCTGGTGCTCTTCTATACCCTGCTGACCAAGCCC CTGGTCAGCCTGATCCAGGCCCTCAGCGGACACGATCCACGCTCGCCGGCACGCATGCGCCTGCCCTGCCCCAAGGGCCACGAACGCGACGAGATCGGCG TGCTGGTGGAAGTCATCAACCGCCAGCTCGGGCGCATCTCGGTAGAGATCGAACAGCGCCGGGAGGCGGAGAACCGCCTGACCCAGTACCTGGAGGAGCT GGAAAGCATCGTCGCCGCCCGTACCGCCGAGCTGAAGGCCGCCAACGCGCGCCTGACGCTATCCAACCAGGAACTCGAAGAAGCCCGCCAGACCGCTCTC GATATGGCCCAGGCCCGCGCCAGCTTCCTGGCCAACATGAGCCACGAGATCCGCACGCCGCTGAACGGCCTGCTCGGCATGCTCTCGCTGAGCCTCGACG GCCCGCTCACCCCGGAACAGCGCCAGCAACTGTCGATCGCCCACGACTCCGGCAAGGTGCTGGTGGAATTGCTCAACGACGTGCTCGACCTCTCCAAGTT CGAGGCCGGGCAACTGGTCCTGGAACAGATCCCGTTCGACCTGGGCGTCCTGGTGGAAGACACCGCCAGCCTCCTCTCGCAGAACGCCGCGGCCGGCGTG GAGCTGACCTGCCTGGTCGACCCCGCCCTGCCCGCCCAGGTTTCCGGCGACCCGACGCGGATTCGCCAGGTCGTCAGCAACCTGCTGTCCAACGCGCTGA AGTTCACCCGCCTGGGGCGGGTCGACGTTCGCGTGGAAGCCACCGCCGAGGGTGTGCGCATCAGTGTGCGCGACACCGGCATCGGCATCGCCCAGGAGGC GCTGGATCGCATCTTCCAACCGTTCACCCAGGCCGACGCGGGTATCACCCGCCAATACGGCGGCACAGGCCTCGGCCTGGCCCTCACGCGCAAGCTGTGC GAGGCCATGCAGGGCGAGCTGACGGTGGAGTCGACGGTCGGCCTGGGCAGCCTGTTCAGCGTCGGCCTGCCGCTGGCGCCGGTCAGCCCTCCGCTGCAAG CGCTGCCGCTGCGCGGCCGGGTGATCGCGCAATGCTCGGCCAACAGCGGGCTGGCGCAGCTGCTGCAAACCTGGCTGCCGCGCTGGGGCCTGGAGTACAA GCGTCTGGAGACCGACGACAGCCTGCTCGGCCACTCGCTCGACGTACTGATATCGGATTGCCCGGACTGTCTGATGGGACTGCGTCCGAGCATCGGTACG CCGATCCTGCTGGTCACCGCCTACGGCAGTTTCCTCGAACCGGAGCTGGCCCGCCGCCTGTCGCCGCTGCGCCAACTGGCCAGGCCGCTGAGTCGCAACC AGTTGTACCAGGCCCTGAAACACGTGCTCGAACACACTGCCATAGCCCCGTCGAGCGCCTCGGACACCACGGGAGAACAGCGCAACACCCGGGTCCTGCT GGTGGAGGACAACCCGGTCAACCAGTTGGTCGCCAAGGGCCTGCTGCACAAGCTCGGCTGCCAGGTATGGATCGCCGAACACGGGCTGAATGCCCTGAAG ATGCTGGAGGAGCATCCCATCGACCTGGTCCTGATGGACTGCAACATGCCGGTGATGGACGGCTACGAAGCGACCCGGCAGATCCGCGACAGCGGACGCT GGGGCGGCCTGCCGATCATCGCGCTGACCGCCAACGCCCTGCCGGACGAGCGCGAACGTTGTCGTGCCGCCGGCATGGACGACTACCTGGCCAAGCCTTT CCACCGCGACGAACTGAAAGCCATCCTCGACCGTTGGTGCCCGCTCACCGCGAGCGACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCGGCCTCGCGACGACGGCTAGCCTCCTACCACCAGACGGAAGCGCGACAGCAATCCGCCCAGGCGCTGGTGCAGGTCGAACATCTCGTTGAGGTCGAAA CCGGTGCTGCAGATCAGCTGCTGGCGCAGCGGAATGACCCGTTCGCGCAAGGTGATCCCCGGCACCGTCAGCGTCAGGTGCACTTCCCGCTCATCGTGAC TGGCGCGACGGCGATCCACCAGGCCGAGCTGTTCGAGACGCTTGAGCAAGGGCGTCAGGGTTCCGGAGTCGAGCAGCAGGCGGTCGCCCAGGGCCTTCAC CGTCGGCTGCTCCGGCGGGCTCGCATGCCACTCCCAGAGCACCAGCATGACCAGGTACTGCGGGTAGGTCAGGCCGATCTGTTCGAGCAGCGGCCGATAG CCGCGGATCACCGCGCGCGAGGCGGCGTACAGCTTGAAACACAGCTGGTTGTCGAGCAGCAGCGATTCTTCGACGCCATCCGGCCTGGCGACTTTTCCCC
|
|
Amino Acid Sequence |
>histidine kinase
MLGGRTSPRLIPAPMDIALTHRLSFKQASLTVLVAFILGTLLSLIQVGVDYASQDASINREVRALLDVSHNPAARIAYNIDAELAQELVLGLLRSPAVVR AEIIDTSGLPLASASREPAESRLRPLSDFLFGHKRVYEDPLHVDHAPGEALGVLHLEIDTFVFGNDFLRRAGITLLSGFVRSLLLSLILLVLFYTLLTKP LVSLIQALSGHDPRSPARMRLPCPKGHERDEIGVLVEVINRQLGRISVEIEQRREAENRLTQYLEELESIVAARTAELKAANARLTLSNQELEEARQTAL DMAQARASFLANMSHEIRTPLNGLLGMLSLSLDGPLTPEQRQQLSIAHDSGKVLVELLNDVLDLSKFEAGQLVLEQIPFDLGVLVEDTASLLSQNAAAGV ELTCLVDPALPAQVSGDPTRIRQVVSNLLSNALKFTRLGRVDVRVEATAEGVRISVRDTGIGIAQEALDRIFQPFTQADAGITRQYGGTGLGLALTRKLC EAMQGELTVESTVGLGSLFSVGLPLAPVSPPLQALPLRGRVIAQCSANSGLAQLLQTWLPRWGLEYKRLETDDSLLGHSLDVLISDCPDCLMGLRPSIGT PILLVTAYGSFLEPELARRLSPLRQLARPLSRNQLYQALKHVLEHTAIAPSSASDTTGEQRNTRVLLVEDNPVNQLVAKGLLHKLGCQVWIAEHGLNALK MLEEHPIDLVLMDCNMPVMDGYEATRQIRDSGRWGGLPIIALTANALPDERERCRAAGMDDYLAKPFHRDELKAILDRWCPLTASD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|