Pseudomonas aeruginosa PAO1, PA1794 (glnS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0044267 cellular protein metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03950
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004819 glutamine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006425 glutaminyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00440
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006412 translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50715
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0043039 tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00987
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Translation, post-translational modification, degradation Other PAO1 genes in this class
Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Glutamate metabolism ECO:0000037
not_recorded
KEGG pae00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCyc TRNA-CHARGING-PWY tRNA charging 19.5 ECO:0000250
sequence similarity evidence used in manual assertion 		12867747
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Aminoacyl-tRNA biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.240.10 Ribosomal Protein L25; Chain P IPR020056 Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal 464 551 6.9E-34
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 211 221 2.7E-8
FunFam G3DSA:1.10.1160.10:FF:000001 Glutamine--tRNA ligase - - 262 339 3.5E-31
Gene3D G3DSA:1.10.1160.10 - IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily 262 340 5.6E-34
PANTHER PTHR43097 GLUTAMINE-TRNA LIGASE - - 22 552 0.0
CDD cd00807 GlnRS_core - - 28 343 0.0
Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain 28 321 4.4E-109
FunFam G3DSA:2.40.240.10:FF:000001 Glutamine--tRNA ligase - - 337 462 3.6E-53
SUPERFAMILY SSF50715 Ribosomal protein L25-like IPR011035 Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily 341 552 4.6E-69
FunFam G3DSA:3.90.800.10:FF:000001 Glutamine--tRNA ligase - - 102 210 4.4E-42
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 29 249 1.2E-109
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 61 74 2.7E-8
FunFam G3DSA:3.40.50.620:FF:000037 Glutamine--tRNA ligase cytoplasmic - - 1 344 0.0
Gene3D G3DSA:3.90.800.10 - - - 102 210 1.2E-109
Hamap MF_00126 Glutamine--tRNA ligase [glnS]. IPR022861 Glutamine-tRNA ligase, bacterial 1 553 54.021183
NCBIfam TIGR00440 JCVI: glutamine--tRNA ligase IPR004514 Glutamine-tRNA synthetase 30 553 0.0
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 28 347 7.04E-98
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 32 44 2.7E-8
Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain 341 532 7.1E-58
Gene3D G3DSA:2.40.240.10 Ribosomal Protein L25; Chain P IPR020056 Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal 349 463 9.4E-45
PRINTS PR00987 Glutamyl-tRNA synthetase signature IPR000924 Glutamyl/glutaminyl-tRNA synthetase 46 57 2.7E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.