Pseudomonas aeruginosa BL23, Q077_04045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL23 genomic scaffold adgfb-supercont1.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGTGGCCTGCATCGACCTGCCCACCTGCCATGGCGAGTGGTGGCCGCGGATGGACTTCGCCAACGGCTTCCACCTGACCCAGCACATCGGCCCCAAC TACCTCGGCGGCCAGCTCGACAGCGACGCGCGCACGGCGATCCACATGACCCACCGGATCGGCGCGCTGTGCGTGACCCTGGTCCTCCTGCTGCTCGCCT GGCGCCTGCAGCGCAGCGGCCTGGTCTGGCCGACCGCGCTGATGCTGCTCGGCCTGTCGCTGCAGATCGGCCTGGGCATCAGCAACGTGCTGCTGCACCT GCCGCTGCCGGTGGCGGTGGCGCACAACGGCGGTGGCGCCCTGCTGCTGCTCAGCCTGGTGCTGGTCAACTATCGCCTGCGCGCGCCGGCCAGCGTCCGC GCGCCGGCACCGTCGCCGCAGCGCGTGCGCCGCACGCTGCCGCCGGCGCAAGGTTCGCGGCTGAAGGCCGCCTGACAGACAGAAGGATGGAGGTAAGGAT
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| DNA Sequence for Gene |
>Q077_04045
ATGGCCACCGTCATCGATCGCCACAGCCAGCCGACCTGGCGCGACTTCCTCGAACTGACCAAGCCCAAGGTCGTGGTGCTGATGCTGATCACCTCGCTGA TCGGCATGCTGCTCGCCACCAAGGCGCCGCTGGATGGCTTCGTGCCCTGGCAGGTGCTGATCTTCGGCAACCTCGGCATCGGCCTTTGTGCCGGCGCGGC GGCGGCGGTCAACCATGTGGTGGACCGGCGCATCGACTCGATCATGGCGCGGACCCACAAGCGGCCGCTGGCCGAGGGCCGGGTGTCGCCGAGCATGGCG CTGGGCTTCGCGCTGCTCCTGGCGCTGGCCGGGATGGCCGTGCTGCTGGCCTTCACCAACCCGCTGACGGCCTGGCTGACCCTCGCCTCGCTGCTCGGCT ACGCGGCGCTCTACACCGGCTTCCTGAAGCGCGCCACGCCGCAGAACATCGTCATCGGCGGGCTCGCCGGGGCGGCGCCGCCGCTGCTCGGCTGGGTCGC CATCACCGGCCACCTGAGCGCCGAGCCGCTGTTGCTGGTACTGATCATCTTCGCCTGGACCCCACCGCACTTCTGGGCGCTATGCATCCACCGCAAGGAC GAATACGCCAAGGCCGACATCCCGATGCTGCCGGTGACCCACGGCGAGCGCTACACCAAGCTGCACATCCTGCTCTATACCCTGGTGCTGTTCGCGGTGA GCCTGATGCCGTTCGTCATCCACATGAGTGGGCTGGTCTACCTGCTCTGCGCCCTGGCCCTGGGCGCGCGCTTCCTCGACTGGGCCTGGGCGCTCTACTG TGACAGCCGGCCACATGCGGCGATAAAGACCTTCAAGTACTCTATCGTCTACCTGTTCCTGCTGTTCATGGCGCTGCTGGTGGACCACTATCTGCCGCTG AAGCTGCTTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCACTCTAGAGCCTTGCCCACCCATGACTCGAGTCAACAAGACCGTCCTCGTCCTCGTCGCCCTGGTCGCCCTGGTCCTCGGCCTCACCGTGCACAAG GTGCTCACCGCCCAGCGCCAGGCCGATCCCACCGTGCTGCTCGACGCCGGCATCGTGATCCTGCCGCAGACGCGCAAGGTGCCGGCGCTGGAGTTCACCA ACCAGGACGGCCAGGCGGTCAGCACTGCCAGTCTCAAGGGTCGCTGGCACCTGCTGTTCTTCGGCTACACCTTCTGCCCCGATGTCTGCCCGACCACCCT CGCCCAGCTCCGCGAATTGCAGGGCAAGCTGCCGCAGGAGGTGCGCGACGACCTGCAGGTGGTATTCATCAGCGTCGATCCGAACCGCGACACGCCGCAG CAGATCAAGCAATACCTGGGCTACTTCAACGCCGGCTTCCAGGGGCTCACCGGCACTCCGGAGAACATCCAGAAGCTGGCCAACGCCATGAGCATCCCCT
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPLAEGRVSPSMA LGFALLLALAGMAVLLAFTNPLTAWLTLASLLGYAALYTGFLKRATPQNIVIGGLAGAAPPLLGWVAITGHLSAEPLLLVLIIFAWTPPHFWALCIHRKD EYAKADIPMLPVTHGERYTKLHILLYTLVLFAVSLMPFVIHMSGLVYLLCALALGARFLDWAWALYCDSRPHAAIKTFKYSIVYLFLLFMALLVDHYLPL KLLL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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