Pseudomonas aeruginosa BL23, Q077_03509

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa BL23 genomic scaffold adgfb-supercont1.4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTTCAGCGGTGCCGGACCGGAACTCTTCGAGCTGTCCCTGGTGGATTTCGCCGGCAACGGCGCGCGCCTGGCGCACAACCGCAAGCTGCTGGAAACG GTACTCGGGTCGATGGACGCCCTCAGCAGCCGGGTGAGCTGGACCGACACCCTGAAGAGCAAGATCCTGCTCGGCGTCTGGGGCGAGTTTCCCGCCCTCG ACCGCCACTACGTGGCCGCCTGTCGCGCGCTGTATCCACGCCGGGGCCTGACGAGCGTCAACGGCGGGACCCTCACCGCGCTGCACCGCCTGATCGGCGA AGAAAGGCTGTCGTTCCCGCGCCTGGAGACCGCCCGCAAGGGGCTCCTCTACCCCACCGGGCGCCTGGCCGACATGGCTTTCTTCCAGTACGGCCTGGAA AACGCCTGAGGCGCTGCGCCGCCGATCCGGGGGACTTGTAGGCATGCCCTCGCTGTAAGTAGTATGAGACTCATTCTCAATTACAACAGCGATCCCCTCC
DNA Sequence for Gene
>Q077_03509
ATGCCGCCGGCCGACGCCTCTCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCG CGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGT CGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCG GAACAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG AAGGCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGAT GGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCCGCGGGCGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGCGCCA GGCCTGCGCCCAGTGGCGGCAGCGCAGCCCGCAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGCGCTG GCCCTGCCGACCCTCGGCCGCGAGCACGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCCACCT GGCAGGCCGAACCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGCCCGACGGCAGCCTGCTGACCCTGAA CACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCGTCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPP EQRLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAFRQCLELME
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site