Pseudomonas aeruginosa PAO1, PA1706 (pcrV)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0005615	extracellular space	IDA Inferred from Direct Assay	ECO:0001230 mass spectrometry evidence used in manual assertion	25488299	Reviewed by curator
Cellular Component	GO:0030257	type III protein secretion system complex	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	21479247	Reviewed by curator
Biological Process	GO:0030254	protein secretion by the type III secretion system	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	21479247	Reviewed by curator
Cellular Component	GO:0005576	extracellular region	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01592	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
PseudoCAP		Type III secretion system		ECO:0000037 not_recorded

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	108	128	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	156	179	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	228	249	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	250	269	1.9E-69
Coils	Coil	Coil	-	-	121	141	-
SUPERFAMILY	SSF103388	Virulence-associated V antigen	IPR036139	Virulence-associated V antigen superfamily	26	293	3.66E-99
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	131	153	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	206	226	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	269	291	1.9E-69
Pfam	PF04792	V antigen (LcrV) protein	IPR005413	Low calcium response V antigen	74	294	3.7E-68
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	87	105	1.9E-69
PRINTS	PR01592	Low calcium response V antigen signature	IPR005413	Low calcium response V antigen	30	55	1.9E-69

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.