Pseudomonas aeruginosa PAO1, PA1657 (hsiB2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCCACCCGTGGCTGGATCAGCGCCCATGTCATGCCCCATCTCCAGAACGACAGTGCGCCGCGCAAGGTCGAGACCGTGGCCCTGCAGGCCGAATGGG ACGTCGCCCTGGACGAGGTCCAGCCGGTGTTGCGCAAGGACGGCCTGAAGGCGGCGGTACAGGTGTTGAAGCAGGGCATGAAGCGCGCCCACGGCGGGCG AGCCCGGTTCTTCTGGCAACTGAGCCTCGCGCGACTGTGCTTCCTGGCGAAGAAGTACGAGCTGGCCAAGACCCAGCTGGAGAGCCTCGACCATCAGTTG CACGAATCGGGATTGCACGCCTGGGAGCCCGATCTGGCGCTGGATGTACTGCACCTGCTGCATAGCTGCTGCGAGCTGTTGCCGCAGAACCACGCCGTGC GAGAACGCAAGGAAGACATTTATCGCAGGCTGTGCCACCTCGATCTCGAGGTGGTGCTCGAATAGGGCTTCGCGCCCTCAATTCTCAAGGAGAAAAAGCC
|
|
| DNA Sequence for Gene |
>PA1657
|hsiB2
ATGGCCAAAGAAGGCTCGGTAGCCCCAAAGGAACGCATCAACGTCACCTTCAAGCCCGCCACTGGCGGTGCCCAGGAAGAAATCGAACTGCCGTTGAAGC TACTGGCGATCGGCGATTACACCCAGCGCGCGGATGAGCGCAAGGTGGAGGACCGCAAGCCGATCGGCATCGACAAGATGACCTTCGACGAGGTCCTGGC CAAGCAGGAGCTGGGGCTGACGCTGAGCGTACCCAATCGTCTCCAGGAGGAGGGCGGCAGCGACGAGCTGGCGGTGGGGCTGCAGATCAACTCGATGAAG GACTTCAACCCGGCCAGCATCGTCGAGCAGGTGCCCGAGCTGAAGAAGCTGATGGAGTTGCGCGATGCGTTGGTGGCCCTCAAGGGCCCGCTGGGCAACG CCCCGGCGTTCCGCAAGGCCATCGAAAGCGTACTCGCCGACGACGAGTCCCGTAGCCGTGTGCTGGGCGAGCTGGGGCTGAGCGCCGCCCCCTCCCAGGA CGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCACCCCCTAGCCAAGGAAGCAGATACATGAGCACCAGTGCCGCACAGCAAGGCCGGAACCAGAACGGCGAATACAACATTCTCGACAGCATCATCGCC GAGACCCGCCTGAGCCCGGACGACGAGGCCTACGACATCGCCAAGCGCGGCGTCTCCGCCTTCATCGAGGAATTGCTCAAGCCGCAGAACGACGGCGAGC CGGTGAAGAAGGCGATGGTCGACCGGATGATCGCCGAGATCGACGCCAAGCTCAGCACGCAGATGGACGAGATTCTCCATCATCCCGATTTCCAGGCGCT GGAGTCGGCCTGGCGCGGCCTGCAACTGCTGGTCGACCGCACCAACTTCCGCGAGAACATCAAGATCGAGATTCTCAGCGTTTCCAAGCAGGACCTGCTG GACGATTTCGAGGACTCGCCCGAGGTGATGCAGTCCGGCCTGTACAAGCACATCTACACCGCCGAATACGGCCAGTTCGGTGGCCAGCCGGTCGGCGCCA
|
|
| Amino Acid Sequence |
>HsiB2
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTQRADERKVEDRKPIGIDKMTFDEVLAKQELGLTLSVPNRLQEEGGSDELAVGLQINSMK DFNPASIVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIESVLADDESRSRVLGELGLSAAPSQDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|