Pseudomonas aeruginosa BL24, Q078_00881
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa BL24 genomic scaffold adgeY-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCGAGCTGCGCCAGATCACCCATCAGGGCCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAAGCCGAGCAGAGCGTGGAGGTCAGCG CCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCAAGGGCGGCAACATCGAACTGGGCAT GCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGTCCCGCTCATGCATCGACCAGCTTCAACGCCTGGGATTCGACACCGTTCGATGAC CGGTATGTCCTGCGCGACGAAGCCACGCTGGAGCCGTTACCCAATATCGCCGTTGAAGTGATACGAGGCGATGGTGGTGTGGTGAAACTGATGACCGACA GCCAGGGCCGTTTACCCAAGCAACAACACCTGGCCATGGACCCGGTGCAGATACGCATCCTGGGCAAGGGCAGTCACAACAGCGACACGGAGTCCAACAC
|
|
| DNA Sequence for Gene |
>Q078_00881
ATGAGCAGCGAACCGCTCGAGCCGAATCAGGATGTGATCATCCCTCGCTCTCGCGACAGTCTGGGACGGCCTGTCTACAAGGCGCAGTTGACCCGTACCG ACAACCAGAGCGAAAAGGTGGCACTGGTTCGGCAGACCGCTCCCCTGCCGGTGATCTTCATTCCGGGGATCATGGGAACCAACCTGCGCAACAAGGCAGA TAAAAGCGAGGTCTGGAGGCCGCCGAATGGTCTGTGGCCCATGGATGACCTGTTTGCCTCCATCGGTGCGTTGTGGACTTGGGCCTGGAGGGGTCCAAAG GCCCGTCAGGAGCTCCTGAAGGCTGAGCAAGTAGAAGTCGATGACCAGGGTACGATCGATGTCGGTCAATCTGGTTTGTCCGAAGAAGCTGCCCGCCTGC GCGGCTGGGGCAAGGTCATGCGCAGTGCGTATAACCCGGTCATGGGATTAATGGAGAGGCGACTGGATAACATCGTCAGCCGGCGGGAACTCCAGGCATG GTGGAATGACGAAGCCCTCTCTCCTCCTGGAGATCAGGGTGAGGAGCAGGGAAAGGTTGGGCCGATCGATGAAGAGGAATTGCTCAGGGCCAGCCGATAC CAGTTCGATGTCTGGTGCGCCGGCTATAACTGGCTACAGTCCAACCGGCAGTCGGCGCTGGATGTACGCGACTATATCGAGAATACCGTGTTGCCTTTCT ACCAAAAGGAGTGCGGTCTCGATCCCGAGCAGGTGAGACGTATGAAGGTCATTCTGGTCACCCATTCGATGGGAGGGCTGGTGGCTCGCGCCCTGACGCA GTTGCACGGCTATGAGCGCGTATTGGGGGTGGTGCATGGCGTACAACCTGCGACAGGTTCCTCGACCATCTACCATCATATGCGCTGTGGCTATGAAGGT ATCGCACAGGTCGTGCTGGGGCGAAATGCCGGTGAAGTGACAGCCATTGTCGCCAATTCGGCCGGCGCGCTGGAATTGGCCCCTAGCGCGGAATACCGGG AAGGGCGTCCCTGGCTGTTTCTATGCGACGCGCAGGGGCAGGTGCTCAAGGATATCGATGGAAAGCCTCGGGCTTATCCGCAGAATCAGGACCCTTATGA AGAGATATACAAGAACACTACGTGGTATGGATTGGTGCCTGAGCAAAATTCACAATATATGGACATATCAGACAAAAAAGAAGGTTTAAGAGTTGGCCCC CGTGATAACTTTGAAGACTTGATAGATAGCATTGCTAATTTTCATGGTGAATTGTCAGCAGCAGGATATCACTCAGAGACCTATGCCCATTACGGAGCTG ACGATAGCCGCCATAGTTGGCGCGACCTGATCTGGAAGGGTGACCCTACCCCTCTGGAGACCCCCGGTGCCACACTCAACGACGATGAGAACGGCACTTA CAACAGTTGGTTCCGCCGGGGCTTGCCCACCATAGTGCAGGGTCCGCTGGAGACGGGAAATCCTCTGGACGCTTCCGGTAGCGGAGGTGACGAAACGGTA CCGACCGACTCCGGCCAGGCGCCTGCCCTGGCGGGCGTCAAGGCCAGCTTTCGGCATGGCAGCAAGGGCAAGGGACAGGCCAATACCAAACGGGGCTATG AGCACCAGGAGAGTTACAACGATGCTCGTGCTCAATGGGCAGCGCTATATGGGGTGATCAAAATCACCCAGTTGGCGGATTGGCATCCTAATGACAAAGG AGGGACATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCATCCCCGTCGGTTGCTTGCTGTACTTGGAGTGGTGGTCTTGACCAGCATGACCAGTTGCACTTCGTTTTCTTCTTCTCGGAGCTCTTCCATGGACAA GACCGGATGGATTACTCATTGCTTTGGTCGCTTTCTGATTGATCTGCCACCTGACGCGGTAATCAATGCCGGATACTACCTATGGGGAGACAGAATTGAG TACTTAGATGATAAACCTACCGAACTGGCAGCCAGGGTTGATCGTCTTGAACAAGAGTGGAGGACTCAGAGACATAAATCCAAAGGTAACATGTTTCTTC GTAAAATTGACTTTGGCAATGAATCAGTAGGTTTATTGTCTTGGTCTTCAGAGGTTGCCTCTAAAACCTATTTATTGGATACCTATGTTACATCTAAGCC TACGTGGCATGCCTATCGTTGGAAAGGGAAAGTTTCGGTAGACAGAGAGCAACATGCTGTGGAGATATCTAGGGCTTTAGCTCGAAATCTACGTTCTCGC
|
|
| Amino Acid Sequence |
>membrane protein
MSSEPLEPNQDVIIPRSRDSLGRPVYKAQLTRTDNQSEKVALVRQTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPMDDLFASIGALWTWAWRGPK ARQELLKAEQVEVDDQGTIDVGQSGLSEEAARLRGWGKVMRSAYNPVMGLMERRLDNIVSRRELQAWWNDEALSPPGDQGEEQGKVGPIDEEELLRASRY QFDVWCAGYNWLQSNRQSALDVRDYIENTVLPFYQKECGLDPEQVRRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPATGSSTIYHHMRCGYEG IAQVVLGRNAGEVTAIVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKNTTWYGLVPEQNSQYMDISDKKEGLRVGP RDNFEDLIDSIANFHGELSAAGYHSETYAHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIVQGPLETGNPLDASGSGGDETV PTDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|