Strain | Pseudomonas aeruginosa BL25 genomic scaffold adgfY-supercont1.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGTCCGGCTTCCAGGGCGTGGGCCGGCGCTTCCAGGTCTACGGCGAGCTGCAGGTCGAGGGTGGCAGCGTGATGCTGGTGGACGACTACGGCCACCATC CGCGCGAAGTCGCCGCGGTGATCAAGGCGATCCGTGGCGGTTGGCCGGAGCGTCGCCTGGTGATGGTCTACCAGCCGCATCGCTATACCCGTACCCGCGA CCTGTACGAAGACTTCGTGCAGGTGCTGGGCGAAGCCAACGTGCTGCTGTTGATGGAGGTCTATCCGGCCGGCGAAGAGCCGATCCCGGGAGCCGACAGC CGCCAGCTGTGCCACAGCATCCGCCAGCGCGGCCAGCTCGACCCGATCTACTTCGAGCGCGACGCCGACCTGGCGCCGCTGGTCAAGCCGCTGCTGCGCG CTGGCGACATCCTGCTTTGCCAGGGCGCTGGCGATGTCGGCGGCCTGGCCCCGCAACTGATCAAGAACCCGCTGTTCGCCGGCAAGGGAGGGAAGGGCGC
|
|
DNA Sequence for Gene |
>Q079_05618
ATGAACCTTTGCCTCGATAGCCTGCTGAACGGCACCCAGGATCCCAAGGCGTTCGGCCGTGTCGCCGTGCTGTTCGGTGGCAAGAGCGCCGAGCGCGAGG TGTCGCTGAAGTCCGGCGCGATGGTCCTGCAATCCCTGCTGGCCGCCGGGGTCGATGCCTTCGGCATCGATGTCGGCGAAGACCTGCTGCAACGCTTGGT CGAGGAGAAGATCGACCGTGCCTTCATCATTCTCCACGGTCGTGGCGGCGAGGATGGCAGCATGCAGGGCCTGCTCGAGTGCGCGGGCATTCCCTACACC GGCAGCGGCGTGCTGGCCTCGGCGCTGGCGATGGACAAGCTGCGGACCAAGCGGGTCTGGCTCAGCCTCGGCCTGCCGACCCCGGACTACGCGGTGCTGG CCAGCGAGGATGACTGCCGCGACGCGGCGCAGCGACTGGGTTTCCCGCTGATCGTCAAGCCGGCTCACGAAGGCTCGAGCATCGGCATGGCCAAGGTCGG CGGGCTCGACGAATTGATCGCGGCGTGGCGCGAAGCGGCCCGCTACGACTCGCAGGTGCTGGTCGAGCAGTGGATCAGCGGCCCGGAATTCACCGTGGCG ACCTTGCGCGGGCAGGTGCTGCCGGCGATCCGCCTGGGCACGCCGCACACCTTCTACGACTACGACGCCAAGTACCTGGCCAGCGATACCCGCTACCAGG TGCCCTGCGGTCTCGACGAGGCCAAGGAACGCGAGCTGAAGGAACTCACCGCGCGCGCCTGCGACGCCCTGGGCATCCAGGGCTGGGGGCGGGCGGACGT GATGCAGGACGCCGAAGGGCGTTTCTGGCTGCTTGAAGTCAACACCGCACCAGGCATGACCGACCACAGCCTGGTGCCTATGGCCGCTCGGGCCGCCGGC CTGGATTTCCAGCAACTGGTGCTGGCGATCCTGGCCGATAGCCGCGAGGCGAGGGGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCATGAACGGCGTACTGCTCCGTCATCAGCAACCCGGTGGACTCGGCCGCGCTCCGCGCAAGCCGATGCCGCGCGGCGCCAGCCGTCTGGTGGCCAAGG AACCGCTGAGCGTGCGCCTGCCGAAAGCCGACTTCAGTTTCCTCAAGTACCTGGCTTGGCCGCTGTTGCTGGCCGTTCTCGGCTATGGCGCCTATCGCGG CGCCGAGTACATCCTGCCGTACGCCGACCGGCCGATCGCCAAGGTCAGTGTCGAGGGCGACCTCAGCTACATCAGCCAGCGCGCGGTGCAGCAGCGGATT TCCCCGTACCTGGCGGCGAGCTTCTTCACCATCGACCTGGCGGGCATGCGCGGGCAACTGGAACAGATGCCCTGGATCGCCCACGCCGAGGTGCGCCGGG TGTGGCCGGACCAGGTGGTGATCCGCCTGGACGAGCAACTGCCGATCGCCCGGTGGGGCGACGAAGCGCTGCTGAACAACCAGGGACAGGCTTTTACGCC
|
|
Amino Acid Sequence |
>D-alanine--D-alanine ligase
MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGEDLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYT GSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCRDAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVA TLRGQVLPAIRLGTPHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAG LDFQQLVLAILADSREARG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|