Pseudomonas aeruginosa M8A.1, Q080_04975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.1 genomic scaffold adgfk-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGCGTCGAAACGGGCCTCCTCCACCTCGCAGTGGAAACGGATCTTCTCGCGCAGACGGTACTTGTCCGCGCAATGCCGCAGGTAGTCGAGGATTTCC GCCTGCGGGGCGAACTTGCGCGACCAGTCGGCCTTCGGCTCGAAGGAAAACGAATAGAGATGCGAGGGGACGTCGCAGGCGGCGCCCGGGTAGCGGTTTT CCCGCCAGCAACCGCCGACATCGGCGGCCTTTTCCAGGACCAGATAATCGTCGATGCCTGCCTGTCGCAGGCGGATCGCCAAGCCGAGACCGGCGAAGCC GGCGCCGACCACCAGCACCCGCAAGGGGGCTTCAGGGCGGGACTCGTTGTGCATTGTTGTGCTCCCGTTTGTTGCTTGCCACGCCGTCCGGCGCGATTCC GCCCAGCGGCGGATGGCAGCATCCTAGTTCGCCGGGGCGACTGGCGTTATGGCCGGGCCGGACATAAAGTTGTGATTTTCGGTCAACCTCGGACGCCACC
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| DNA Sequence for Gene |
>Q080_04975
ATGCCCACTCCGCCCTGGTCTCCCCGCCGCAGCGCCATCAGCGCGCACCTGCTGATCCAGTTCGGCATCGACCGCGGCCTCGGCCTGGAGCAGTGCCTGG CAGGTAGCGGCCTGGATATCCGTCTGCTCGGCGATCCCTCCGGGGAAATCGACGCGGCCCAGGAACTGAGCGTAGTGCGCAACCTGGTCCGGCACCTGGG CGACGCCTGCGCGCCGGGCCTGGCGGCAGGCCTGCGCTATCACCTCAACGCCTACGGCATCTGGGGCTTCGCCCTGCTCAGCAGCCCGACCTTCCTCAGC GCCGCGCAACTGGGCCTGCGCTACCTCGACCTGACCTTCGCCTTCCTTGGCATCCGCCTGGAGGTACACGACGATGAAGCGCACCTGGTGCTCGACGACG CCGGCATTCCCGAGGACCTGCGGATTTTCCTCCTCGAACGCGACGCCGGTGGCGTGCTGCGCATCCAGCGCGACCTCACCGGGCAGCGCCTGCCGATCCT CCGCGCCGGCTTCCGCCGCCCACCGCCCGCCGATCCCGCGCCCTACGTGCGCGAGCTGGGCCTGTGCCCGGCGTTCGGCCAGGCGGACAACCGGGTGGTC TTCGAACGGCGCTTCCTCGACCTCCCGCTGCCCGGCGCCAATCCAGAGGTGGCGCGCGCCTGCGAGGAGCAGTGCCGCGCCCTGCTCGCCCGCCGCCAGG TGCGCGGCGGTCTGGCCGGACGCATCCGCGACCGCTTGCTGAGGACGCCCGGCCACTTGCCGGACATGCAGACCCTGGCCATGGAACTGCACCTCACCGT GCGTACCCTGCGTCGCCGCCTGGACGACGAGGGCAGCAGCTACCGCCTGTTGCTCGACGAGGTGCGCCAGGCCCTCGCCGAAGAGCTGCTGGCCACCGGC GCGATTCGCCTGGAGGAGATCGCCGAGCGCCTCGGCTACGGCGAGGTGTCCAACTTCAGCCATGCCTTCAGGCGCTGGAAAGGCATGACGCCGCGCCAGT ATCGCCAGCGGCGACGACTCGACGCGATGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCTCCGGGCTTATTCCACGAAGGCAGGACGCCAGCGCTCGATGTTCGTTTCGCCGCCGCCTGCCAGCGGCTAGATTGGCCGTTCACGCGCGGCATCC GGCGGCGCGGCAGCGGAGGCATCTCCGCTGGCAACGGGAGAACGACACATGGGTTGCCAGCAACACGCATGGCCGGCGCACGCGCCGGAGCAGGTCGAGG CCGAGGTCAACTATATCCGCGACAACGGCCAACGGCCGGTCGCCTACACCTATCCGGCCCCCGCCGGGACGCCGCAGCGCAGCGCGCTGTTGCAGCCGAC CCGGGTGGCGATCCGCAATGCGCGTCTGCTGGCGCAACCGGCCAGCCTGGAGCGCGAGGGTTTCCAACTGGTGCGCGAGGCGAGCGCGGTGGGCGATTTC GAGGATGAAGCCCAGGTTCGTGAACGCTACTACCCGGAAAGCATCGCCCTGCTCCGCCGCCTGACCGGCGCCGCCGAGGCGGTGATCTTCGACCACACGC
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| Amino Acid Sequence |
>AraC family transcriptional regulator
MPTPPWSPRRSAISAHLLIQFGIDRGLGLEQCLAGSGLDIRLLGDPSGEIDAAQELSVVRNLVRHLGDACAPGLAAGLRYHLNAYGIWGFALLSSPTFLS AAQLGLRYLDLTFAFLGIRLEVHDDEAHLVLDDAGIPEDLRIFLLERDAGGVLRIQRDLTGQRLPILRAGFRRPPPADPAPYVRELGLCPAFGQADNRVV FERRFLDLPLPGANPEVARACEEQCRALLARRQVRGGLAGRIRDRLLRTPGHLPDMQTLAMELHLTVRTLRRRLDDEGSSYRLLLDEVRQALAEELLATG AIRLEEIAERLGYGEVSNFSHAFRRWKGMTPRQYRQRRRLDAMS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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