Pseudomonas aeruginosa M8A.1, Q080_04609
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.1 genomic scaffold adgfk-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTGGCAAATAGCCGCTGCGAATGATGGAGGGGAGAAATTCTTCGGCGTTTCAGAAGGATGGCCGCGCCAATGTTGCAGTCATGCGTCGCAGACGAAA TTTTTTTAATAATCTTTAGGAATCAGCTAGTTAGAAATCGGTATTGAATGCCTCGCCGCTCCTGCCGGCGTTCCGCGCAAGAACTGCGCTAAGGCGCTGC GACAACCGTTCCCGGCTGCTCCATGGCGTACATCGCTATCGCCGATGCGGCGATAGCGCCGGGCACAACCCATCAGAATGGATAGGGGTTGGCGTCCTTT CGCGCAATGCTCCGCGGTTGCCCGGAGATTGCGGTTACATGCGCTAATTATTTGCCGTTGTTATCCGTTCCCCTCTGTGACAGCGCGGGCAGGTGCCCGG CGCCCCGGCGTGCGCAGCAGGAGACGGAAATGCCGATCGATCATGGGAAAGCGCTCTGCCCCGGACGAGGGCCACGACAGCGGCGCAAGGAGGTCGGCAG
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| DNA Sequence for Gene |
>Q080_04609
GTGAGCCCGGCCGTTTCCCTGCAATTGTTCTGCCTGCCTTATTCGGGGGCCAGCGCCACGCTGTTCCGCCGCTGGCAGCCCAGCCTGCCGGGCTGGATCC GCTTGTTGCCCCTGGAATTGCCGGGGCGCGGCCTCCGCTTCGGCGAGGCCCTGCATACCGATGCCGCCAGCCTGGTCGCGCAATTGGCCAGCGAGCTGCA AGGCACCCTCGACAGCGCTTCTCCCTACGCCTTCTTCGGCCACAGCCTGGGCGGGCTGCTGGCCTTCGAACTGGCCCATGCCATGCGTCGGCGCGGCCTC GAAGGGCCGCTGGCGCTATTCCTCTCCGGTGTATCCCCGCCCGCCGAAAACGATGTCAGCGGCTACCGGCGCGCCAAGGCCGACGCCGAACTGGTTGCCG CGTTGCGCGACTACCGGGGTACTCCGGAGGCCGTCCTCAACGATCCGTCGCTGATGCAGATGCTGTTGCCAGTGGTGCGAGCGGACTTTCTCGTCACCGG CAGCTACCGCTACCAGGCGCATGGGCCGCTGGACGCGGCGCTGCACCTGTTCGGTGGACGCGAGGACAGCCTGCGCAGCGCCGAGTTGCTCGGCTGGCTG CATGAGGCCGGGGGCGACTTCACCCTCGACCTGCTCGACGGGCAGCACTTTTTCATCCGCGAACAGCAGGGGCAGTTGCTGCGCCTGCTGCGTCGCTACG CCGGCCAGCATCTGCTGCGCTGGCACAAGGACAAGGTCCGGGGAAGCATGCGCGCCGCCAGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCGGCCGCGACGACTGTTTCCGGAGACTCACTAGAACTCGATTGCAAGCCGAATTCAGGCAGGAAAACACATGATGGACGCCTTCGAACTTCCCACC ACCCTGGTCCAGGCCCTGCGTCGCCGCGCCGTCCAGGAGCCCGAGCGCCTGGCGCTGCGCTTCCTCGCCGAGGACGATGGCGAAGGCGTGGTCCTCAGCT ATCGCGATCTCGACCTGCGCGCGCGGAGCATCGCCGCGGCCCTGCAGGCCCATGCGCAGCTGGGCGATCGCGCGGTGCTGCTGTTTCCCAGCGGCCCCGA CTACGTCGCGGCGTTCTTCGGTTGCCTGTATGCCGGGGTCATCGCGGTGCCGGCCTATCCGCCGGAGTCGGCGCGCCGCCATCACCAGGAACGCCTGTTG TCGATCATCGCCGACGCCGAGCCGCGCCTGGTCCTGACCACCGCTGACCTGCGCGAGCCATTGCTGCAGATGAACGCGCAACTGTCCGCCGCCAACGCCC
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| Amino Acid Sequence |
>PvdG
MSPAVSLQLFCLPYSGASATLFRRWQPSLPGWIRLLPLELPGRGLRFGEALHTDAASLVAQLASELQGTLDSASPYAFFGHSLGGLLAFELAHAMRRRGL EGPLALFLSGVSPPAENDVSGYRRAKADAELVAALRDYRGTPEAVLNDPSLMQMLLPVVRADFLVTGSYRYQAHGPLDAALHLFGGREDSLRSAELLGWL HEAGGDFTLDLLDGQHFFIREQQGQLLRLLRRYAGQHLLRWHKDKVRGSMRAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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