Pseudomonas aeruginosa M8A.1, Q080_03262
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.1 genomic scaffold adgfk-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGACCGCTTCGAGCTGTTCATCGGCGGCCGCGAGATCGCCAATGCCTATTCCGAGCTGAACGACGCCGAGGACCAGGCCGAGCGCTTCATGTTGCAG GTCAAGGAGAAGGACGCCGGCGACGACGAGGCGATGCACTACGACGCCGACTTCATCAATGCCCTGGAATACGGCATGCCGCCGACCGCCGGCGAAGGCA TCGGCATCGACCGCCTGGTGATGCTGCTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGCCCGCAGGCCTGAGCGCCGCAACA GTCCATGGAAAAGCCGCCTTCGGGCGGTTTTTTCATGGCCGCGCGGTGTCCCGGCCGCCGGGCCAGGGGTCGATAGCCGCCGATCTGCCGGCTGACCACG GGAGGTGCGGGTGGGATCGGAGCTTCCCCGGTAGCGGCCGATTGATTCCACGCGAAAAAGTCCGAACAATGCTCCATCGTCCGCGAGCGGAGGAAACACC
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| DNA Sequence for Gene |
>Q080_03262
GTGTCCCGAGTAGCTCCCAGAGACAGCGCCGCGCAGGCCGCCAGCGCGGTAGCCGAAAGCGTTCGTTACCAGGGCCGCAAGGCCAGCCGCCAGGGCAGCG AGCAGCGGCGCCAGGCGATTCTCGATGCCGCCATGCGCCTGATCGTCCGCGACGGCGTACGGGCCGTGCGCCACCGCGCGGTGGCCGCCGAGGCCCAGGT GCCGTTGTCGGCCACCACCTACTACTTCAAGGACATCGACGATCTCATCACCGACACCTTCGCCCTCTTCGTCGAGCGCAACGCAGAGGCGCTGTCGGCG TTCTGGAGCAGCGTGGAGGGCGACCTCCAGGAGATGGCCGCGGTGCTGGCCGACGACCCCGGCGCCCGTGGCTCGCTGGTGGAACGGATCGTCGAGCTTG CCGTGCAGTATGTCCAGGTCCAGCTCACCGAGCGCCGCGAGCACCTGCTGGCCGAGCAGGCCTTCCGCCAGGAGGCGTTGCTCAACCCGCGCCTGCGCGA ACTGGCCGATGCCCACCAGCGGATTCTCTCCCTCGGCGCCGTGCATTTCTTCCAGGTGCTCGGTTCCGGGCAGCCCGAGCAGGACGCCAAGGTGTTGACG TCGATTATTCTGCAGATGGAATATCAGGGCCTCGTGGACGGGGTCGAGCAACTGGCCGTGGACGAAATGCGCGCCATACTCAGACGGTACCTGAATCTGG TCATGGGCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGAGCGTCAACCCCGCCATGGCGGGGTTTTTCATACCCGAACCTTCCCTCGGCCAGCCGGTCGCAGGTTGCGGAGGGTTCCTAAGGAGCGTGTGATGA AAGCCTGGCGTTGCCTGGTGGTCCTGAGTTTCCTGCTGTTGGGCGGTTGCCTGGTCACCTTCAAGGAGCCGATACCGCCGCGCGAGGCGGCGCCGAGCCA TCTGCTCGGGACCTGGAGCCGCGAGAACGAGTGGAAGGAAGAACAATTCCTGGAGATCACCCGTTCCGGCAGCAATGTCTACCGTGCGCTCAGCTACGTG GACAGCAAGGACAATACCGAGAGCCTGGAAGACTACGGCTTCACCGTCTCCCACCAGGGCAAGCGCTGGTACCTGTCGGCCGGCCTGCCGAAGAGCCTGG GCGGCAACTTCATCATCGCCGGCTTCGAGATCACCGACGGTGACGAGCTGGTGATCTACAACCTCGACGTCGAGCGCATCGTCGAGGACCTCGGCGCCGG
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| Amino Acid Sequence |
>TetR family transcriptional regulator
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSA FWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLT SIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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