Pseudomonas aeruginosa M8A.1, Q080_02809
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.1 genomic scaffold adgfk-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGACAAGATGGGCTATGAACGCGGCCTGGTGCGCTACACCTCGGAACGCGCCCTGGAAGGTGGCCAGACCCGCTTCCTGCGTCCACGCCTGGTCGGCTAC GCGGCGGTGATGCTGGCGATGATCGGCGCCTTCGTCGTCGCCCTGGATGCCCGCCCGCTGGCCTCGCTGGACGTGACCCGCGACCGTGGGCTGTTCCGCG AGAACGCCGCCGGGCAGATCGAGAACATCTACACCCTCAAGGTCATCAACAAGACCCAGCAGCCGCAGCGCTATCGCCTGCAACTCGACGACGCGCCGGA GTTCCGCCTGCAGGGCGAGCACACCCTGAGCCTGAAGCCCGGCGAGATCCTCGACTTCCCGGTGTCGGTGGCCTCTACCGCCGAACGCGCCAGGGCCGGC TCGCAACCGCTGGCGTTCAGCCTGCGCGGCATCGACGACCCGAGCCTGGCGGTCGGCAGCACCAGCACCTTCGTTTCGCCGGCGCGCTGAGGAGGCCGCG
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| DNA Sequence for Gene |
>Q080_02809
ATGAGGCATGACAACACGGTCCCGGCGCGCATAGAGTGGGCGCCAGCGGCCGTGCCCACGGCCAGCCAGGACAGCGGCCAGGACAAGATGAAGCGCTACG AGAAATTCGCCGACGAGATTGCCGAGCTGATCCGCACCGGCGTCCTCGCCCCCGGGCAGAAGGTGCCCTCGGTACGGCACGCCAGTCGTACCTACGGGGT CAGCGCTTCCACCGTGTTCCAGGCCTACTACCTGCTGGAAAGCCGTGGGCTGATCATGGCCCGCGCACGCTCCGGCTACTTCGTCTGCCAGCACGTGCAG CGGCCGCTGCCGGAACCGGAGATCAGCCCGCGCCAGGCCGACGCCACCGAGGTCGACGTCAGCGAGCTGGTGTTCTCCGTACTCAGTTCGATCAAGGACC CGGACACCGTGCCCTTCGGCTCGGCGTTTCCCAGTCCGCAACTGTTTCCCCTGCCGCGCCTGGCGCGCTCGATGGCCCACGCGGTGCGCGACATGGACCC GCAGTCGGTGGTCGCCGACATGACGCCGGGCAACCATGGCCTGCGCCGGCAGATCGCCCTGCGCTACATGGTCGGCGGCCTGCTGCTGCCGGTGGAAGAA CTGGTCATCAGCAACGGCGCGCTGGAGGCACTCAACCTCTGCCTGCAGGTGGTCACCCGTCCCGGCGACCTGGTGGCCATCGAGGCGCCGGCGTTCTACG CCACCCTGCAGGTGCTGGAACGGTTGAAGCTGAAGGCGGTGGAAATCCCCGTGCATCCGCGTGAAGGCATCGACCTGGAAGTGCTCGCCGACAGCCTGGA GCGCCTGCCGATCAAGGCCTGCTGGTTCATGAGCAACTTCCAGAACCCGATGGGCGCGAGCATGGACGACGAGAAGAAACGCGCCCTCGCCGAGCTGCTG GCGCGCCACCAGGTGCCGATGATCGAGGACGACGTGTACGCCGAACTGTACTTCGGCCAGCAGGCGCCGAAACCGGTCAAGGCCTACGACCAGGAAGGCC TGGTGATGCACTGCAGTTCCTTCTCCAAGAGCCTGGCGCCGGGCTACCGGGTCGGCTGGGTGGCCGGCGGACGCTACGCCGAGCAGATCGAGCGACTGAA GCTGATGACCAGCCTGTCGGCGTCGATCCCGGCCCAGGCGGCCATCGCCGACTATCTCCAGCACGGCGGCTACGACCGCCACCTGCGCAAGCTGCGCTAC GCCCTGGAGACCCAGCAGAACGCCATGCTCGCGGCGGTGGCGCGTTACTTCCCCGAGCAGACCCGGGTCAGCCGTCCCAGCGGCGGCTACTTCCTCTGGC TGGAGTTGCCCGAGGCGGTCGACTCGCTGCGCCTGTTCCAACTGGCCCTGGCCCAGGGCATCAGCCTCGCCCCGGGGCCGATCTTCTCCGCCACCCGCCG CTTCGCCCATTGCGCCCGGCTCAACTACGGGCACCCGTGGAGCGCGCGGCAGGAGAAGGCGATGGAGACACTCGGGCGGATCACCCAGTCGCTGGCGGGA TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCCCGCAGACGGAAAGCCACCCCGGCGTAGGGCGGATAACCGCGCGCGGTCATCCGCCATGATCGGCTCGCGTCCCCCATCCCGGTATGCGCCGCCGC CCTGCACGAACGCCTTCCCCCGCCCCATCTGATACCCAAATTCCATATCGACCTGAAGCTGTTTTACCCCCGCCCCAGCCCTTAGATTGCAGGCTCCGGC CGGCGCCCCGTCTCCCCCCTCGACGGCGGTCGCCGGCTGTTCATTTCTTTCGGGACTGTACAGATGAACAAAGCAACGACGGAACCTGCCTACAACTACA AGGTGGTTCGCCAGTTCGCCATCATGACCGTGGTATGGGGCGTGATCGGCATGGGGTTGGGCGTACTGATCGCCTCGCAACTGGTCTGGCCCCAGATGAA CTTCGACCTGCCCTGGACCAGCTTCGGCCGCCTGCGGCCGCTGCATACCAACCTGGTGATCTTCGCCTTCGGCGGCTGCGCGCTGTTCGCCACCAGCTAC
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MRHDNTVPARIEWAPAAVPTASQDSGQDKMKRYEKFADEIAELIRTGVLAPGQKVPSVRHASRTYGVSASTVFQAYYLLESRGLIMARARSGYFVCQHVQ RPLPEPEISPRQADATEVDVSELVFSVLSSIKDPDTVPFGSAFPSPQLFPLPRLARSMAHAVRDMDPQSVVADMTPGNHGLRRQIALRYMVGGLLLPVEE LVISNGALEALNLCLQVVTRPGDLVAIEAPAFYATLQVLERLKLKAVEIPVHPREGIDLEVLADSLERLPIKACWFMSNFQNPMGASMDDEKKRALAELL ARHQVPMIEDDVYAELYFGQQAPKPVKAYDQEGLVMHCSSFSKSLAPGYRVGWVAGGRYAEQIERLKLMTSLSASIPAQAAIADYLQHGGYDRHLRKLRY ALETQQNAMLAAVARYFPEQTRVSRPSGGYFLWLELPEAVDSLRLFQLALAQGISLAPGPIFSATRRFAHCARLNYGHPWSARQEKAMETLGRITQSLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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