Pseudomonas aeruginosa M8A.2, Q081_01924

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa M8A.2 genomic scaffold adgfd-supercont1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCCTGGCGCTGGCGATCCTGGCGCTGGCCGGCTGCTCGTATTTCTTCGCGCCGCGGGTCGAGTTGCAGCGGCTGACCCTGGATGTCGCCGCGCGCGCCA ACGACGACTCGCCGATCGCCGTGGATTTCGTCGCGGTGAAGGATGCGGAGCTGTTCAAGGAACTGGCCGGACTGCCGGCCAGCCAGTGGTTCGCCAATCG CGAGCAGTACCGCCGCGACTACCGGCAGCAGTTCGCGGTATGGAGCCTGGAGCTGGTCCCGGGGCAGTTCATCGAGTCGGAGTCCTTCCCCTTGCGCGGC GACCGCGCAACTGGACTTTTGGTCTTCGCCGGCTATAACACACCCGGCGCGCACCGCTTGCGCCTCGACCAGCAGCAGCGCGTCTGGCTGCGTCTGGATA CCCGGGAAATGCGACTGGTCAACGATCCCGCCACGCGTTAGCGGAGGGGCAGGCGAGCGACCGTCGTGCACGACAACGTAGGACGTCGAAGGGGAGTCGT
DNA Sequence for Gene
>Q081_01924
ATGAGTGTTCTGCCTGACGCGGTGTGCTGGCACGAAGGGATGCAACTGCTTCCCCAGCATTTCCAGTTGCAGGGATTGCGTGCCGAGGCGCTGGCGGCGC GCATCGGACAGGCCTGCAACCCTTGGTTCTGGGGAGTGACCGCCCTGGAACTGGACCCCTCGGCGTTGTGCGCCGGCCAGGTGCGGGTCCTGCACCTCGA AGCGATCCTGCCCGACGGCCTGCCGGTGAGCGTGCAGGCTGGTGTCGACGCGCCGCTGGAGTTCGATCTGGAGACAGCGCTGGCGGCCGCCGAAGGGCCG CTGCTGAACGTCCACCTGGCGGTCAGTCCGCTGTGGCGGGCGGGTCAGTTGCTGCCGCTGAAGGGCCGTCTGCAATCGCGGGTCGGCGCGCCGCTGCCGG ACCTGGCCAGCGGCGAGCACCCCGAGCCGATCACCGTCTGGCGAGCGTCGCTGCGGCTGGTCGGCGACGACGGCAAGGCCGACTCCGTGTGCCTGCCGTT GCTGCGCGTGGCGAAGGAGGGCGGCGCCTACGTCAGCCTGCCCTACGTCCCGCCGACGCCACTGATCCTGCCGGAGTCGCCCCTGGGCAGACGCGTGCAG TCACTCTGCGCGCGGGCCCGGGAGAAGGCGCTGTTCCTCGGCGGGCGCCTGCGCCTGGCGCAGCAGGCGGGCAACCAGGACGACGCGGTGGAAATCCGTC GCCAGCTTGCCGCGCTCTGGACCCGCCTGCCGGAGGTCGAAGGCCTGCTGGCAAGCCGTGCGGCCTCGCCGCTGGCCCTGCACGGCAGCCTGCTGGGCCT GGCCGGTGCCTGGGCGGCGCTCGATCCGCTGGCCGGCGTGCCGGCCTTCGAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGAC TGGTTGGAGCGCGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGCCGTTCGAGCAGGAGGAACAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGC CGCGTCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGAACAGGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCA CCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGCCGCGGCAGCCGATGAATCGCCAGGAACAGGTGGCCTACAGCGTTGGCGACGACACCCGTTTG TTCGTCGTGCAGGGTGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGCGCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGC TGTTCGTCGCCGACGGCAGCGACAACACCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACAGGAAGGAGCCGCCAATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGAGCAGCCGCTCAGCACGGCATTCCGCCAGGCCTGGCAGGA ATGGCTGGAGGCCTGGGGCGCCCTCGACCGGGACGCCCAGGATGTGCCACGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGCATCACCCGGCGTCTG TGGCGCAGCGCCTTCGCCAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCA GCGCCTGGCCGGGGCAGGGCGCCTGGCAGGACAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCG CCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCCTGCGCGGGCCGCGCGGC
Amino Acid Sequence
>type VI secretion protein
MSVLPDAVCWHEGMQLLPQHFQLQGLRAEALAARIGQACNPWFWGVTALELDPSALCAGQVRVLHLEAILPDGLPVSVQAGVDAPLEFDLETALAAAEGP LLNVHLAVSPLWRAGQLLPLKGRLQSRVGAPLPDLASGEHPEPITVWRASLRLVGDDGKADSVCLPLLRVAKEGGAYVSLPYVPPTPLILPESPLGRRVQ SLCARAREKALFLGGRLRLAQQAGNQDDAVEIRRQLAALWTRLPEVEGLLASRAASPLALHGSLLGLAGAWAALDPLAGVPAFEALDFLDLRRGYEPLLD WLERAIESIRAGYRCLPFEQEEQVFSVRLPDPAPRQRLVVGLRMPAGAGEQAAADWLERAIVASDPHLPLLARQRMSGLPRQPMNRQEQVAYSVGDDTRL FVVQGAGDWFDAGQPLRIVAPVSGVASSPWQIVLFVADGSDNT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site