Strain | Pseudomonas aeruginosa M8A.3 genomic scaffold adger-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGACAACCTCACCCAGGGCATCGTCGCCCGCGCCGGCAACGACCCGCGCGAGATCGGCGCAGCCTCGGTGGAATACCTGCATCTGTTCGGCTATACCGC CTACGCCTACCTCTGGGCGCGCATGGCCGCCGCCGCGCTGCGCCAGCGCGAGGTCGACCCGGCGTTCCACGACGGCAAGCTGGCCACCGCGCGCTTCTAC TTCGCCCGCATCCTGCCCCGCGTGCACTCCCTCGCCGCCGCCGTCGAAGCCGGCAGCGAAAGCCTGTACGGCCTGGAGGCGGAACAGTTCTGAAGCTTCC GTCGAGCGTTGTCGCGCGGCCCGTGGGCCGCGTGTTTTTTCCGGGACAGCATGCAACGCGCTGTCCGCCGACAGCCCGCGATAACGGCGGATAACCGCGA AGCGGTTATTCGCCCTACGACGCCCGGGAAGCCGGCCAGGCATTCTTGAAAAACGACGCAACCGCCGGTTATTCGCTAGACCAGGAACAAGGACATATCC
|
|
DNA Sequence for Gene |
>Q082_03916
ATGCGAACCCTCACCACCCTCCTCGGCAACAGCCAGAAACTCGACGGCGGCGCCATGTTCGGCAATGCCCCGCGCGCGCTCTGGTCACGCTGGATGCAGC CCGATGCGGAGAACCGCATCGACCTCGGCTGCCGTGCCCTGCTGGTGCGCGACGGCGAGCGCAACGTACTGGTGGAGGCCGGCATCGGCGCGTTCTTCCC GCCCGCCCTGCGCCAGCGCTACGGCGTCCAGGAAGAGCGCCACGTACTGCTCGACAGCCTCGCCGCGGTCGGCCTGGACGACGCCGACATCGACGTGGTG CTGCTCACCCACCTGCACTTCGACCACGCCGGCGGCCTGCTCGCCGCCTGGGAAGAAGGCCAGCCGGCGCGCCTGCTGTTCCCCAACGCGCATTTCGTCA GCGGCCGCCGCCACTGGCAGCGCGCGCGCCAGCCGCACCCGCGCGACCGAGCCTCGTTCGTGCCGGAACTGCTCGACCTGCTGCAGGCCAGCGGACGCCT GGAGCTGCTCGATGACGGCGAGCGCTCGGCGCACCTGGGCGAGGGCTGGCGTTTCCATTTCAGCGAAGGCCATACCCCGGGCCAGATGCTCCCGGAGATC GCCATGCCCGACGGCCCGGTGGTATTCAGCGGCGACCTGATCCCCGGCGCACCCTGGGTACACCTACCGCTGACCATGGGCTACGACCGCTTCCCGGAAG GCCTAATCGAGGAAAAGGAACGCCTGCTGGACAGCCTCATCGCCCGCAACGGCCGACTGGTCTTCACCCATGATCCGTGCGTCGCCATGGGCCGGGTGCG ACGCGACGAACAGGAGCGCTACAGCCTCTACGACACCCTCGAGCGGGTCGAGAACCTCGAGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGAAAGGCGCGGCCCGCCCCGGCGGCGGGCCGCGGGAATCAGGAACGCGCCTTGCGCGCGCCCTTGCAGCGCTCGATGCCGAGCCGGCAGATCCGCTCG CAGAGTTCGGCGAAATCGATCCCGGCCGCCGCCGCGGCCTGCGGCAGCAGGCTGGTGGCGGTCATGCCCGGCAGGGTATTGACCTCCAGGCACCAGAGCC GGCCCTGTTCGTCAAGGCGGAAGTCGGTGCGGCTGTAGCCGCTCAGCTTCAGCGCCCGGTGTACCTTCAGCGCCAGACGCTGGGCCTCGGCGGCGATCGC CGGCGGCAGGTCGGCGGGAAACACCTCGCGCACCGCGCCGGCCTGGTACTTGTGCTCGTAGTCGAAGACCTCCTGGCCGCCGAGGAGAATCTCGCCCACC GGCAGCGCCTGGTCGTCGAGCACCCCGACGGTGACCTCGCGGCCGGCGACGAAGCGCTCCAGCATCACCTCGTCGCCATAGCGCCCGGCCAGCTCGATGG
|
|
Amino Acid Sequence |
>beta-lactamase
MRTLTTLLGNSQKLDGGAMFGNAPRALWSRWMQPDAENRIDLGCRALLVRDGERNVLVEAGIGAFFPPALRQRYGVQEERHVLLDSLAAVGLDDADIDVV LLTHLHFDHAGGLLAAWEEGQPARLLFPNAHFVSGRRHWQRARQPHPRDRASFVPELLDLLQASGRLELLDDGERSAHLGEGWRFHFSEGHTPGQMLPEI AMPDGPVVFSGDLIPGAPWVHLPLTMGYDRFPEGLIEEKERLLDSLIARNGRLVFTHDPCVAMGRVRRDEQERYSLYDTLERVENLEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|