Pseudomonas aeruginosa M8A.3, Q082_02875
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.3 genomic scaffold adger-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCATGTGCACGTCTTCCAGGTCGACGCGCCAGTCGAAGCTGCCGGCTTCGATTTCCGCCTGGATCTGTTGCAGGCCGTCGACGATCGCATCGCGCTCG GCGTCGCTCAGCACGCCGACCTTGGCCAGCATCGTGGCGTGGGCGATGGAACCCATGATGTCGTGGCGGTAGAGACGCTTGTCGAAGTCGACGGAGGCGG TGAAACGGGCGACGAAGGCGTCGACGGGCTCGCTGAAGCGGCCGCCCCAGGACTGGTTGGTCTTCTCTACGCTCATGGTATCTCTCGCTGCAACAAGAAA CGGACAGGCCGCGCGGCCTGCGTGACGGGCAAAGTGCGACGATGATAGCAGGCCGGGAGGAAAAACCGGCGGCTCGTCGACGAAGCCGGAACGAGCGCTG TTTCGCGGTTTTTTGCGGCAGATGGCATTTCGGTGCTTTATTTCGCCCGTACGCCCGCGGCTGTCTTGCGGGCGCCACGGGCCTTGCGGAAACTCTGTCG
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| DNA Sequence for Gene |
>Q082_02875
ATGCCTATCCGATTCAAGCCCGGCCGCTCGACCCGGCCGGCCGTCCAAGACGACTTCTTCATTCCCGAGCTCTGCGAAGCCGAAGCCCTGTTCACCCTGG TGCTGCTGGCGGAGCTGCTGGTGCTCGTGCTGGTGCTGGCGGAGCCGATGACGCCGAGCTTCAACTGGGTGCGCCTGGCCCTGGCGTCGCTGTTCGTGCA GTGGATCGTGCTGCTCTCGGCGGCGCTGTTCTGCCGCCTGCGGCCATTGCTCGCGCGCCTGCCGGTGGCGCTGGCGGGGAGTGCCTGCTGCCTGTTGGTG GTGGGCCTCACCCTGGGCTGCACGGCGGTCGCCGAGCACTATCAGCTGGGCGGAGAACTGACGCGTGCCGGCGAGGTCAATCTGTATCTGCGGCACGCGC TGATCGCGCTGATCATGTCCGCCCTGGTGCTGCGCTACTTTTACCTGCAGAGCCAGTGGCGCCGGCAGCAGCAGGCCGAGTTGCAGGCGCGCCTGGAATC GCTGCAGGCGCGGATTCGCCCGCACTTCCTGTTCAACAGCCTGAACAGCATCGCCAGCCTGATCGAGCTGGACCCGCAGAAGGCCGAGCATGCGGTGCTG GACCTGTCCGACCTGTTCCGGGCCAGCCTGGCGAAGCCCGGCACTTTAGTTTCCTGGGAGGAGGAACTGGCGCTGGCAAGGCGCTATCTTTCCATTGAGC AGTATCGTCTTGGCGATCGCCTGCAACTGGACTGGCAGGTGCACGGGGTGCCGGCCAACCTGCCGATCCCCCAACTGACCTTGCAGCCGCTGCTGGAAAA TGCGCTTATCTATGGCATCCAGCCGCGGGTCGAAGGTGGCCTGGTGCAGGTCGAGGCGGTTTATCGTGAAGGAGTGTTCCAGCTATGTGTGAGCAACCCC TACGACGAGGCGCTCGAGTCGCCCCCGTCGAAAGGCACGCGACAGGCGTTACACAATATCGATGCACGACTTGGGGCACTTTTCGGGCCTAAAGCGAGTC TCAGCGTCGAGCGCCGTGACGGACGGCACTACACCTGTCTACGCTATCCATGTGCGCGACTCATGCAGGAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTTATGAATGTCCTGATTGTCGATGACGAACCTCTGGCGCGAGAGCGCCTGGCCCGATTGGTAGGGCAACTGGACGGCTATCGCGTCCTCGAGCCCTCG GCCAGCAATGGCGAAGAAGCGCTGACGCTGATCGACAGCCTCAAGCCCGATATCGTCCTGCTGGATATCCGCATGCCCGGTCTGGACGGCCTCCAGGTCG CGGCCAGACTCTGCGAGCGGGAAGCGCCGCCGGCTGTGATCTTCTGCACGGCCCATGACGAATTCGCCCTGGAAGCCTTCCAGGTCAGCGCCGTGGGCTA CCTGGTCAAGCCGGTGCGCAGCGAAGACCTGGCCGAGGCGTTGAAGAAAGCCTCGCGACCGAACCGCGTGCAACTGGCCGCGCTGACCAAGCCCCCGGCC TCCGGCGGCAGCGGTCCGCGCAGCCACATCAGTGCACGGACCCGCAAGGGGATCGAGCTGATCCCGCTGGAAGAGGTGATCTTCTTCATTGCCGACCACA
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| Amino Acid Sequence |
>alginate biosynthesis protein AlgZ/FimS
MPIRFKPGRSTRPAVQDDFFIPELCEAEALFTLVLLAELLVLVLVLAEPMTPSFNWVRLALASLFVQWIVLLSAALFCRLRPLLARLPVALAGSACCLLV VGLTLGCTAVAEHYQLGGELTRAGEVNLYLRHALIALIMSALVLRYFYLQSQWRRQQQAELQARLESLQARIRPHFLFNSLNSIASLIELDPQKAEHAVL DLSDLFRASLAKPGTLVSWEEELALARRYLSIEQYRLGDRLQLDWQVHGVPANLPIPQLTLQPLLENALIYGIQPRVEGGLVQVEAVYREGVFQLCVSNP YDEALESPPSKGTRQALHNIDARLGALFGPKASLSVERRDGRHYTCLRYPCARLMQEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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