Pseudomonas aeruginosa M8A.4, Q083_04537
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.4 genomic scaffold adgfJ-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGGCTTCGTCCTGCCCGGCGACTATGTCGACGTGATGCTCTTCGTGCGTGACGAGCGGGACGGCGAATCGACCCCGCTGGCGCAACTGGTGTTGCCC GGCGTCCGGGTACTGACCTACGGCGAGCGGATCGCCGTGGGCAGCGATGGACAGGACCGCTCGAACCAGGAAAAGGACCCGCGTCCGCCGCGTACCGCGG TGCTGGCGGTACCGGAGGACGGCGTGGCGCGGCTGATGCTGGCGAGCCAGGCCGGTTCGCTGCGCCTGGCCATCCGCAGCAAGGACGAAGAACTCTACCG CAGGGAGCAGGAAGGCGCGCTGCTGCAAGCGTCGCTGGGCGCGCCGAGCGCGGCGCTGAGTCTCGACCAACTGCTGGAGCGCCGCAAACCGACGGCGCCG AGCGTGCGCAGCGCGGCTCCGCGCGTGCCGGTGGCCAACGGGGTCACGGTCTACCGTGGCAGCGCCATGACCCATGAAGTGCCTTGAGGGGAGCCGGCAT
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| DNA Sequence for Gene |
>Q083_04537
ATGCATCGGAGCACCGGGATAGGCGTGTCGCGCTGGCTGGGAGGGCTGCTGGGGGTGGCGTTGGCGCTGCCGGCACTGGCTTTGCCGCAGGGCTGCATCG AGTTGCTGGCGCAGGCGCCGCGGGTCGACGTCGTCCAGGGACAACAGCGTGACCTGCGCCTGGCGGTGCCGATCGAACGGCTGGCCATCGGCGATCCGAA GATCGCCGACGTACAGTTGCTGGATCGTCGCGGCTTCCTGGTCACCGGTAAGGAACAGGGCTCCACCAGCCTGCTGATCTGGACCGGCTGCAGTCCCGAG CCGTTGCGCAGCCTGGTGGAGGTCGAGGGACGCGGTAGCGTCGATACCCGCGGTGCTCCAGCGTTCACCGTCGGCGCCGCAGAGGAGCTGCCGAACCAGG TGCAGACCGATATCCGCTTCGTCGAGGTCAGCCGCAGCAAGCTGAAGCAGGCCAGCACCTCGTTCGTCCGCCGCGGCGGCAACCTCTGGGTGCTCGGTGC GCCGGGCAGCCTCGGCGACATCAAGGTCAATGCCGACGGCAGCGGCCTGGGCGGCACCTTCGGCACCGGCAGCTCGGGATTCAACCTGATCTTCGGCGGC GGCAAGTGGTTGAGCTTCATGAATGCCCTGGAGGGCAGCGGCTTCGCCTATACCCTGGCGCGCCCGAGCCTGGTGGCGATGAGCGGGCAGAGCGCGTCGT TCCTCGCCGGCGGCGAGTTTCCGATCCCGGTGCCGAACGGCACCAACGACAACGTCACCATCGAATACAAGGAGTTCGGCATCCGCCTGACCCTCACCCC GACGGTGATGAACAACCGCCGCATCGCTCTCAAGGTGGCGCCGGAGGTCAGCGAACTGGACTACAGCGCCGGCATCCAGAGCGGCGGGGTGGCGGTGCCG GCACTGCGCGTCCGGCGCACCGACACCAGCGTGATGCTGGCCGACGGCGAGAGCTTCGTGATCAGCGGGCTGACCAGCAGCAACTCGGTGAGCAACGTCG ACAAGTTTCCCTGGCTGGGCGACATCCCGATCCTCGGTGCGTTCTTCCGCTCGACCAAGCTGGACAAGGACGACCGCGAGCTGCTGATGATCGTCACCCC GCACCTGGTCCAGCCGCTGGCCGCCGACGCACAGTTGCCGGACCTGCCCGGCGAGGGCCTGCGGCACTACGATCCGGGGTTCTCGCGCCTGTACTTCCTC GAGCGCGGCGAGTACGACGGCCAGCAGAACGACACCGGTCTGTCGGATTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGGCGCGCATGAACCAGAACTTCGTGGCGCTGACCCAGCATCCCGGCGAACTCGACTGGTTGCAGAACAGCCTGGCGTCCGCCGGCCAGGTGGTTCCGG CAGGCAGCGCCAGCCTGGAGGAGCTGCTGGCGCTGCTCGACGTCACCGCCGCCGGGGTGCTGTTCATCAGCCTCGGCAAAAGCAACCTGGTGTCCCAGGG GGCGCTGGTCGAGGGATTGGTATCGGCGCGGCCGATGCTCTCGGTGGTGGCCATCGGCGACGGCCTGGACAACCAGTTGGTGCTGGCGGCGATGCGCGCC GGCGCGCGCGACTTCATCACCTACGGCGCCCGCGCCAGCGAGCTGACCGGGCTGATCCGGCGCCTCGGCGGACGCCTGCCCAGCGTGCCGGTGAGCGCGG CGCGCCAGGGCGAGCTGCTGACCCTGGTCAGCGCCCGACCGGACGCCGACGGCGCCTTCGTCGCCTTGCACCTGGCCAAGGCGTTGCAGGAGCAGACGCC
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| Amino Acid Sequence |
>secretin
MHRSTGIGVSRWLGGLLGVALALPALALPQGCIELLAQAPRVDVVQGQQRDLRLAVPIERLAIGDPKIADVQLLDRRGFLVTGKEQGSTSLLIWTGCSPE PLRSLVEVEGRGSVDTRGAPAFTVGAAEELPNQVQTDIRFVEVSRSKLKQASTSFVRRGGNLWVLGAPGSLGDIKVNADGSGLGGTFGTGSSGFNLIFGG GKWLSFMNALEGSGFAYTLARPSLVAMSGQSASFLAGGEFPIPVPNGTNDNVTIEYKEFGIRLTLTPTVMNNRRIALKVAPEVSELDYSAGIQSGGVAVP ALRVRRTDTSVMLADGESFVISGLTSSNSVSNVDKFPWLGDIPILGAFFRSTKLDKDDRELLMIVTPHLVQPLAADAQLPDLPGEGLRHYDPGFSRLYFL ERGEYDGQQNDTGLSD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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