Pseudomonas aeruginosa M8A.4, Q083_03589
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa M8A.4 genomic scaffold adgfJ-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGAGGTTCGCCAGGGCCTGCTGGCCTACCGCTGGCCGGGCAACGTCCGGCAGATGCGCACGGTGCTGCGGACCCTGGTGGCACTCTGCGAGGACGGC CGGGTCGGCCTGCGCGACCTGCCCGCGGATATCCGCCAGGCCCTGGCGGCGCTGCCGCCCGCTGCAGCGGCGCCCGCCCCGGCCGCGGGCAACAGCCTGG ACGACGCCGAGCGAGCCGCGTTGCTGGCGGCGCTGGACGGCCAGCGCTGGCACGTGAGCCGGGTGGCCGAGCAACTGGGGATCAGCCGCAACACCCTGTA TCGCAAGCTGCGCCGGCACGGCCTGGTGCGCGGTCAGGCCTGACGGGCGGGACGGCTCCAGGCGGGCCGCCGCGAGGCCGGCGGGAACCCCGCCGACGCC GCGTCGTCTGATGCCGCGACGCCGGGCGGCCGGCGCCTCCGCTGTGCTAATCTGCCGCCCATTCACAGCGCCTTCGACGGCTTGATCTGCAGGAGTCTGC
|
|
| DNA Sequence for Gene |
>Q083_03589
ATGCACATCCACGTACTCGGCATCTGCGGGACCTTCATGGGCTCGCTGGCCGTGCTGGCCAAGGAACTGGGCCACCGGGTGACCGGTTCCGACGCCAACG TCTACCCCCCCATGAGCACCCAGCTGCAAGCCCAGGGCATCGAGTTGATGCAGGGCTACGATCCGGCCCACCTGGAGCCGGCGCCGGACCTGGTAGTGAT CGGCAACGCCCTGTCGCGCGGCAATCCGGCGGTGGAGCATGTCCTGAACAAGGGCCTGCCCTACGTTTCCGGCCCGCAGTGGCTGGCCGACCACGTGCTG CAAGGACGCTGGGTGCTGGCGGTGGCCGGTACCCACGGCAAGACCACCACCACCAGCATGCTCGCCTGGGTCCTGGAGCACGCCGGTATGAGCCCGGGCT TCCTGATCGGCGGGGTGCCGCAGAACTTCGGGGTTTCGGCGCGCCTGGGCGGTACGCCGTTCTTCGTGGTCGAGGCCGACGAGTACGACAGCGCCTTCTT CGACAAGCGCTCGAAGTTCGTCCATTACCGCCCGCGCACGGCGATCCTGAACAACCTGGAATTCGACCACGCGGATATCTTCCCCGACCTCGCGGCCATC GAGCGGCAGTTCCACCATCTGGTGCGCACTGTGCCGGGCGAGGGCCTGATCATTCGCCCGAGCGCCGAGAAAGCCCTGGAGCGCGTACTCGGGATGGGCT GCTGGACCCCGGTGCAGACCACCGGCGAAGGCGGCCAGTGGCAGGCGCGCCTGCTCGCCGAGGACGGCTCGCGCTTCGAGGTGCTGTTCGACGGCATCGT CCAGGGCGAGGTGGACTGGCCGCTGACCGGCCTGCACAACGTCGCCAACGCCCTCGCCAGCCTGGCGGCGGCGCGCCATGTCGGCGTGATGCCCAGCCAG GGCGCGGCGGCGCTCAGCGAGTTCCGCAACGTCAAGCGGCGCATGGAGAAGGTCGCGGAGGTCCGGGGCGTGACCCTCTACGACGACTTCGCCCACCATC CGACCGCCATCGCCACCACCCTCGACGGCCTGCGCAAGCAGGTTGGCGCGGATACCCAGGTGATCGCCATCGTCGAGCCGCGTTCCAACTCGATGAAGCT CGGCGCTCATCGCGACGGCCTGCCGGACAGCGTGCGCCAGGCCGACCAGGTGCTCTGGTACGCGCCGCCGAACCTGGGCTGGGACCTGGCCGCCACCGCC GCGCAATGCGCGATACCGTCGCAGGTCTGCGATACCCTGGAGGCGATCATCGAGCAGGTGCGCCAGCAGGCCAGGCCCGGCGCGCAAGTGGTGATCATGA GCAACGGCGGCTTCGGCGGCTTGCACGGCAAGCTGGCCGCGGCGCTGGCCGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGGCGCGATGAGCGGTCCGGAACGCATTACCCTGGCGATGACCGGCGCCTCCGGCGCCCAGTACGGCCTGCGCTTGCTCGATTGCCTGGTGCAGGAAGA GCGCGAGGTGCACTTCCTGATCTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACCGACGTGGCCTTGCCGGCCAAGCCGCAGGCGATGCAGGCCTTC CTCACCGAATATTGCGGTGCCGCCGCCGGACAGATCCGCGTGTTCGGCCAGAACGACTGGATGGCGCCGCCGGCCTCCGGCTCCAGCGCGCCCAATGCCA TGGTGATCTGCCCGTGTTCCACCGGCACCCTGTCGGCGGTCGCCACGGGGGCCTGCAACAACCTCATCGAGCGCGCCGCCGATGTCGCCCTGAAGGAGCG CCGGCCGCTGGTGCTGGTGCCGCGCGAGGCGCCGTTCTCCAGTATCCACCTGGAAAACATGCTCAAGCTGTCCAACCTCGGCGCGGTGATCCTGCCGGCG
|
|
| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHVLGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQAQGIELMQGYDPAHLEPAPDLVVIGNALSRGNPAVEHVLNKGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTTSMLAWVLEHAGMSPGFLIGGVPQNFGVSARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAI ERQFHHLVRTVPGEGLIIRPSAEKALERVLGMGCWTPVQTTGEGGQWQARLLAEDGSRFEVLFDGIVQGEVDWPLTGLHNVANALASLAAARHVGVMPSQ GAAALSEFRNVKRRMEKVAEVRGVTLYDDFAHHPTAIATTLDGLRKQVGADTQVIAIVEPRSNSMKLGAHRDGLPDSVRQADQVLWYAPPNLGWDLAATA AQCAIPSQVCDTLEAIIEQVRQQARPGAQVVIMSNGGFGGLHGKLAAALAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|