Pseudomonas aeruginosa M9A.1, Q084_03717
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 2 | 147 | 1.3E-22 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 166 | 405 | 4.61949E-118 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 2 | 145 | 7.9E-30 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 165 | 400 | 1.6E-75 |
| Coils | Coil | Coil | - | - | 153 | 173 | - |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 161 | 423 | 4.5E-103 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 1 | 149 | 1.3E-20 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 1 | 147 | 8.54672E-40 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 1 | 160 | 6.8E-40 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 2 | 149 | 3.06E-33 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 164 | 414 | 1.44E-93 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 1 | 419 | 0.0 |
| FunFam | G3DSA:3.20.20.450:FF:000001 | Cyclic di-GMP phosphodiesterase yahA | - | - | 160 | 415 | 4.7E-107 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 159 | 405 | 2.8E-122 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.