Pseudomonas aeruginosa PAO1, PA1163 (ndvB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCAGGCCGGGTTGATGGCCAGGATGCGCGCCGCCATCACCTCGACCTTGGCCTTGCCCACCGAGCCTTCGATGGCATGCACCTGGCGGTTGGTGTT GGTCACGCAGACATCGTCGAGGTCGAACAGGGAAATCTCGCCGACGCCGCTGCGGGCCAGCGCTTCCGCCGCCCAGGAACCGACCCCGCCGATGCCGACC ACCGCGACGTGGCTATCGGCCAGGCGTTGCAGCCCCTCGCGACCGTACAACCGGCCGATACCGCCGAAGCGCTGTTCATCCACCTGCATCACCAACCACC TCTGAAACCGAATCGCGGATTGCCGCGCGCATTATAAAAAGCCGCGGCCGCCGCGTCGCCTGCGTTCTTACGGCTCGTCGCGCAGGCCGGACTAGACTTG CAACAGACCCGCCGGCCCGGCGCCTGTACACCCCGGGGGGTGCGGGGTAGCATGCGCCGCCCCGTGTTCAGCGAAACATCCGGAACCTGGTTTCATCTCT
|
|
| DNA Sequence for Gene |
>PA1163
|ndvB
ATGTCTTCACGCAAGATCGGGCTCAACCTGGTGGTCATCGTCGCCCTGGCCGCCCTCTTCACCGGCATCTGGGCCCTGTACAACCGTCCGGTCAGCGTAC CGGACTGGCCGGAACGCATCTCCGGCTTCTCCTTCTCGCCGTTCCGCCTCAACCAGAACCCGCAGAGCGGCCGCTACCCCAGCGCCGAACAGATGCGCAC CGACCTGGAACTGGTCGCCCGGCACACCCACAGCATCCGCACCTATTCGGTCCAGGGCGCGCTCGGCGACATCCCGGCGCTGGCCGAGGCGTTCGGCCTG CGCGTCAGCCTGGGCATCTGGCTCGGCCCGGACCTGGCCAGCAACGAGGCCGAGATCGCCCGCGCCATCCGCATCGCCAACGAGTCGCCGAGCGTGGTGC GAGTGATAGTCGGCAACGAGGCGCTGTTCCGCCGCGAGGTGACGGCGGAACAGTTGATCGCCTACCTCGACCGGGTCCGCGCGGCGGTCAAGGTTCCGGT GACCACCGCCGAACAGTGGCACGTCTACCGCGAACACCCGGAACTGGCGCAACACGTCGACCTGATCGCCGCCCACGTCCTGCCCTACTGGGAGGCCACG CCGGTGGCCGACGCGGTGGACTTCGTGCTCGAACGCGCGCGCGAACTCAAGGCCGCCTTCCCGAGGAAGCCGCTGCTGCTCGCCGAGGTCGGCTGGCCGA GCAACGGGCGCATGCGCGGCAGCGCCGAGGCGACACCCGCGGACCAGGCCATCTACCTGCGGCGCCTGACCAACGCGCTCAACGGCGAAGGCTACAGCTA CTTCGTCATCGAAGCCTTCGACCAGCCCTGGAAGGTCAGCGCCGAAGGCTCGGTGGGCGCCTACTGGGGCGTCTACAACGCCGACCGCAAGGCCAAGTTC AACTTCACCGGGCCGGTGGTGCCGATTCCCAAGTGGCGCGCCCTGGCCATCGCCTCGGCGGTACTCGCGGTACTCGCCTTCACCCTGCTGCTGATCGACA GTTCCTCGCTGCGCCAGCGCGGGAGGACCTTCCTCGCCGTGGTCTCGTTCGCCTGCGCCTCGGTGCTGGTGTGGATCGCCTACGACTACAGCCAGCAGTA CAGCACCTGGTTCAGCCTGACCGTCGGCGCGTTGCTGGGCGTCGGCGCGCTAGGGGTGGTCATCGTGCTGTTCACCGAGGCCCACGAGCTGGCCGAGGCG GTCTGGACGCGCAAGCGGCGCCGGCCATTCCTGCCGATCACCGCCGCGCGGGCCTATCGGCCCAAGGTGTCGATCCACGTGCCCTGCTACAACGAGCCGC CGGAACTGCTGAAGCAGACCCTCGACGCCCTTGCCCGCCTCGACTACCCGGACTACGAAGTCCTGGTGATCGACAACAACACCCGCGACCCGGCCGTCTG GCAGCCGGTCGAGGCGCACTGCGCGCGCCTGGGCGAGCGCTTCCGCTTCTTCCACGTTGCCCCGCTGGAAGGCTTCAAGGCCGGCGCGCTGAACTTCGCC CTGGGCCACGTGGCGGCGGACGTCGAGGTGGTCGCGGTGATCGACGCCGACTACTGCGTCGACCCCGACTGGCTCAGGCACATGGTGCCGCACTTCGGCG ACCCGCGGATCGCCGTGGTGCAGTCGCCGCAGGACTACCGCGACCAGCACGAGAGCGCCTTCAAGCGGCTCTGCTACGCCGAGTACAAGGGCTTCTTCCA CATCGGCATGGTCACCCGCAACGACCGCGACGCGATCATCGAGCACGGCACCATGACCATGATCCGGCGCAGCGTGCTGGACGAGCTGAGATGGCCGGAA TGGTGCATCACCGAGGACGCCGAGCTGGGCCTGCGGGTGTTCGAGAAGGGCCTGTCGGCCGCCTACTTCGAGCGCAGCTACGGCAAGGGGGTGATGCCCG ATACCTTCATCGATTTCAAGAAGCAGCGCTTCCGCTGGGCCTACGGCGCGATCCAGATCATGAAGCGGCATACCGACGCCCTGCTGCGCGGCCGCGGTCC CGACGGCAGCCGCCTGACCCGCGGCCAGCGCTACCACTTCGTGGCCGGCTGGCTGCCGTGGATCGCCGACGGCCTGAACATCTTCTTCACCCTCGGCGCG CTGCTCTGGTCGGCGGCGATGATCATCGTGCCCAAGCGCGTCGACCCGCCGCTGCTGATCTTCGCGATCCTGCCGCTGGCCCTGTTCGTCTTCAAGGTCG GCAAGATCCTCTTCCTCTACCGGCGCACCGTCGGCGTCGACCTGCGCGACTCGTTCTTCGCCGCCCTCGCCGGCCTGTCGCTCTCGCACACCATTGCCAA GGCGGTGCTGTACGGCTTCGTCACCCGCGGCATCCCGTTCTTCCGCACGCCGAAGATGCGCTCCAGCCACGGCCTGCTGGTGGCCCTGGCGGAGGCCCGC GAGGAAGTCTTCGTGATGCTCCTGCTGTGGGGCGCGGCGGCCGGCATCGTGGCGGTTCAGGGCGTGCCGAGCCGCGACCTGCTGATCTGGGTCGCCATGC TCCTGGTGCAATCGCTGCCCTACCTGGCGGCGCTGGTCATGGCCTTGCTCTCGTCGCTGCCGAAACCGCGCGAGGAACTGGCCGGCGGCGCCGAGCAGAT CGGCGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTCGGGCGAGGCGTCGGGACGGCCGGCCCCGCTCGCCTAAACGGCGTCCCTTCGCCCACGTTTATGCTTTAAGATTCCCCCTTTCCGCTCGACCCGCTC AGGATGCCCTCCCCATGACCGCCTCTTCGCCGAGTCTCTCGCCGACCCTCGAACTCGCCTGCGAGTTGATCCGCCGCCCCTCCGTCACGCCGCTCGACGC CGACTGCCAGGCCCTGATGATGCGCCGCCTGGAAGCCGCCGGCTTCGCCCTGGAGCCGATGCGCATCGAGGAGGTGGACAACTTCTGGGCACGGCGCGGC GGCGACGGCCCGGTGCTGTGCTTCGCCGGGCACACCGACGTGGTCCCCACCGGCCCGCTGCAGGCCTGGCAGCACCAACCCTTCGACGCCCTGATCGACG ACCAGGGCATGCTCTGCGGGCGCGGCGCGGCGGACATGAAAGGCAGCCTGGCGTCGATGATCGTCGCCGTCGAGCGCTTCGTCGCCGACCACCCGGAGCA
|
|
| Amino Acid Sequence |
>NdvB
MSSRKIGLNLVVIVALAALFTGIWALYNRPVSVPDWPERISGFSFSPFRLNQNPQSGRYPSAEQMRTDLELVARHTHSIRTYSVQGALGDIPALAEAFGL RVSLGIWLGPDLASNEAEIARAIRIANESPSVVRVIVGNEALFRREVTAEQLIAYLDRVRAAVKVPVTTAEQWHVYREHPELAQHVDLIAAHVLPYWEAT PVADAVDFVLERARELKAAFPRKPLLLAEVGWPSNGRMRGSAEATPADQAIYLRRLTNALNGEGYSYFVIEAFDQPWKVSAEGSVGAYWGVYNADRKAKF NFTGPVVPIPKWRALAIASAVLAVLAFTLLLIDSSSLRQRGRTFLAVVSFACASVLVWIAYDYSQQYSTWFSLTVGALLGVGALGVVIVLFTEAHELAEA VWTRKRRRPFLPITAARAYRPKVSIHVPCYNEPPELLKQTLDALARLDYPDYEVLVIDNNTRDPAVWQPVEAHCARLGERFRFFHVAPLEGFKAGALNFA LGHVAADVEVVAVIDADYCVDPDWLRHMVPHFGDPRIAVVQSPQDYRDQHESAFKRLCYAEYKGFFHIGMVTRNDRDAIIEHGTMTMIRRSVLDELRWPE WCITEDAELGLRVFEKGLSAAYFERSYGKGVMPDTFIDFKKQRFRWAYGAIQIMKRHTDALLRGRGPDGSRLTRGQRYHFVAGWLPWIADGLNIFFTLGA LLWSAAMIIVPKRVDPPLLIFAILPLALFVFKVGKILFLYRRTVGVDLRDSFFAALAGLSLSHTIAKAVLYGFVTRGIPFFRTPKMRSSHGLLVALAEAR EEVFVMLLLWGAAAGIVAVQGVPSRDLLIWVAMLLVQSLPYLAALVMALLSSLPKPREELAGGAEQIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|