Pseudomonas aeruginosa C20, Q085_04302
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa C20 genomic scaffold adgfy-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGCTACCCCCGGCAGGCGTAGCCGCGGCCGCCTGCCTCGGCAAAAAGCCATCAGCCGGCGCGCTTCGACGCCCCTCATGGCGCCCTTTCGCCAACTAC CAATTCTCATAGTTGTGAGGGGAAATTTGTATCTTATTTTAAATACCCACGAAACATATAAAAACACACACAGCGAAACACTTCGGAAAACCAACGCAAG GTGGAAGTGCAATGCGTGACCGTGAATCCATTCTCATCGCTTTTCTCTCTTTCCTGACGATAAGACTGCATGGCAGCAGTTGACTGCCCTTGAGTCGACG GCACTCCGTATTTCCATAACGGTTTTTCCGGGCAAGGCGCCTCGACGCTTGCCGCTCGCGTGAGCGAGCCGGTGGGCGGCGGACGACTGGCAGAGCCCGG GAAGACTCGGTCGCCGTCTTCGCGAAAAACCAAAAATCCTTCATTTAGCCGAAGAAGCCGGCAGATGGACTCATTTTTTCGAAAAAAGGCGATTGCCAGA
|
|
| DNA Sequence for Gene |
>Q085_04302
ATGTCCCAGAACTCCCTGCTCGACCTGTACGCGCACCCGACGGTGGTGGCCCGCTTCAGCGAAATGGCAGCGCTTCATCCCCATCGCGAAGCCATCAGGG ACCGTTTCGGAAGTGTCGACTATCGGCAACTCCTGGATAGCGCCGAACAACTTTCAGACTATCTTCTCGAGCATTATCCGCAGCCGGGAGTTTGTCTTGG AGTGTACGGCGAATATTCTCGGGAAAGCATTACCTGCCTGCTCGCCATACTGTTATCCGGCCATCACTACTTATATATAGACCTGAAACAACCGGCGGCC TGGAATGCAGAGTTGTGCCGGCAGGTCGACTGCCGCCTGATCCTCGACTGCTCGACCACGCCGACGCCGGCCAACGGTCTTCCCTGCGTCCCGGTCAGGC ACCTGCCTGCCGCTCCAGCCTCGGTCGCCCGGCCATGCTTCGCGGCGGACCAGATCGCCTACATCAACTTCTCCTCGGGCACCACCGGCCGCCCGAAAGC CATCGCCTGCACCCACGCCGGCATTACCCGCCTGTGCCTGGGCCAGTCGTTCCTCGCGTTCGCTCCGCAGATGCGCTTCCTGGTGAACTCGCCGCTGTCC TTCGATGCGGCGACCCTGGAGATCTGGGGTGCGCTGCTCAACGGCGGCTGCTGCGTGCTGAACGACCTCGGCCCCCTCGACCCGGGCGTGCTGCGCCAGT TGATCGGCGAGCGCGGAGCCGACAGCGCCTGGCTCACCGCCTCGCTGTTCAACACCCTGGTGGACCTCGACCCGGACTGTCTCGGCGGCCTTCGCCAGTT GCTCACCGGCGGCGACATCCTCTCGGTGCCGCACGTGCGCCGGGCGCTGCTGCGGCATCCGCGACTGCACCTGGTGAATGGCTACGGACCGACGGAGAAC ACCACCTTCACCTGCTGCCATGTCGTCACCGACGACGACCTCGAGGAAGACGACATCCCCATCGGCAAGGCCATCGCCGGCACCGCGGTGCTCCTGCTCG ACGAGCAAGGACAGGAGATCGCCGAGCCCGACCGGGCCGGGGAGATCGTCGCCTTCGGCGCCGGCCTGGCGCAGGGTTATCGGAACGATGCGGCGCGCAC CCGCGCCAGCTTCGTCGAGTTGCCCTATCGCGGCCGCCTCCTGCGTGCCTACCGTACCGGCGACCGCGCTCGCTACGACGAGCAGGGCCGGCTGCGCTTC ATCGGCCGCGGCGATGGCCAGGTCAAGCTGAACGGCTATCGCCTCGACCTCCCCGCCCTGGAACAGCGCTTCCGCCGCCAGCCGGGCATCCTCGACTGCG CCCTGCTGGTCCGCGAGCGCAACGGCGTCAAGCAACTGCTCTGCGCCTGGACGGGAAAAGCCGACGCCAGCCCGCAGGCCCTGCTCCGCCAACTGCCCAC CTGGCAGCGCCCGCATGCCTGCGTCCGGGTCGAGGCCTTGCCCTTGACGGCACACGGCAAGCTGGACCGCGCCGCCCTGCTGCGCCGCCTGGAAGAACCG CTGGAGCGCTGCGCCAGCGCGCTCGATCCCGACCAACGCGGCTGCGCGCAGCTGTGGAGCGAATTGCTGGGTTGCGAGGTCGGCGCCGCCGACCAGGATT TCTTCCTCTGCGGCGGCAACTCGTTGCTCGCCCTGCAACTGGTCGCCCTCTGTCAATCGGCGGGTGCGGGAGCAAACCTGGGACTCGCCGACTTGCAGGC AAACTCGCGCCTCGACCAGTTCAGCCGTCTCCTGCGCAGCCACGGCCTGGCGCCGGAGCGTCTGCTGGAACGGGCGGCGACGCCGGAGCAGCCGCTGGTG CTGTCGAGGAGCGCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGTCGGTCTCTCCGCGGAGGTGCGCTACCACTGGTTCCGCGAGCACCTGGTGGTGGTCGGCGATTGGCACCGCCTGTCCCCCTCCGAGCGCGACCGCCT GCGGCACCAACCGATGCCGGATGAGGCCGCGCAGTCCTTGCGCGTCGACCTGTCGCCCTGGTCCTGCGGGATGGTCTTCAGCGAGCTGCTCGGCGCCGAC CTGACCCGCTTCGGCCTCTGCTACCTGGCTCCGGCCGAGGTGCCGGCATCCGACCTGACGCGCCTGGGACGGCGCCTGCGCGAAGAGTTCCCGTTGCTCG ACAGCCAGGTGGACAGCGGCGCGGAAGGTTTCGAACTGGTCGTCCACGGGCGGCCCGAGGAGAGCCCGGCGCTGGAAGTCGGCCCCTTCGCCGACGAAAA CGCGCTCATCGCAGCGCTGCTGCAACGCCCGCATTCCCTGTTCGAGCGCGGCCTGCTGCGACTGTTCCACGGGCGCTGCGGAGGACGTGCGCGCTGGGGC
|
|
| Amino Acid Sequence |
>AMP-binding protein
MSQNSLLDLYAHPTVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAA WNAELCRQVDCRLILDCSTTPTPANGLPCVPVRHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLGQSFLAFAPQMRFLVNSPLS FDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTEN TTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEQGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRF IGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRERNGVKQLLCAWTGKADASPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAALLRRLEEP LERCASALDPDQRGCAQLWSELLGCEVGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHGLAPERLLERAATPEQPLV LSRSAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|