Strain | Pseudomonas aeruginosa C20 genomic scaffold adgfy-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATGCCCTCGGTCATCCGCCGACCGACGGCGCCCTGGCCTCGCGGGTCCAGCGCGAGTGCCTGAGGCGCGGCCTGATCCTCGAACTGGGCGGCCGCCACG GCAGCGTGGTGCGCTTCCTGCCGCCGCTGATCATCGGCGCCGAACAGATCGACGAGGTGGCCCGGCGTTTCGCCCGCGCCCTCGGCGCGGCGCTGGCCGG CTAATTTTCCCGCCGGGCTTTTCGTTATCCAACGCAAGGGCCGTGCTGCGCGCGGCCGTTCGATCCCATCAGGAGCAAGCAATGACTTCAGTGTTCGACC GTGACGACATCCAGTTCCAGGTAGTGGTCAACCATGAGGAGCAGTATTCCATCTGGCCGGAATACAAGGAGATTCCCCAGGGCTGGCGGGCGGCCGGCAA GAGCGGCCTGAAGAAGGACTGCCTGGCCTACATCGAGGAAGTCTGGACCGACATGCGCCCGCTGAGCCTGCGCCAGCACATGGACAAGGCGGCCGGCTGA
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DNA Sequence for Gene |
>Q085_03036
GTGGGCGGTACGCCCGTACGGCTGTTCTGCCTGCCGTATTCCGGCGCCAGCGCCATGACCTACAGCCGCTGGCGGCGCAAGCTGCCGGCCTGGCTGGCGG TGCGTCCGGTGGAGTTGCCGGGGCGCGGGGCGCGGATGGCCGAGCCGTTGCAGACCGACCTGGCGAGCCTGGCGCAGCAACTGGCGCGCGAGCTGCACGA CGAGGTCCGCCAGGGCCCCTACGCGATGCTCGGGCACAGCCTCGGCGCCTTGCTCGCCTGCGAGGTGCTGTATGCCTTGCGCGAGCTGGGTTGCCCGACG CCGCTGGGGTTCTTCGCCTGCGGCACCGCGGCGCCGTCGCGACGCGCCGAGTATGACCGCGGTTTCGCCGAACCGAAGAGCGACGCCGAGCTGATCGCCG ACCTGCGCGACCTGCAAGGTACGCCGGAAGAGGTGCTGGGCAACCGCGAGCTGATGAGCCTGACCCTGCCGATCCTGCGCGCCGATTTCCTGCTCTGCGG CAGCTATCGTCACCAGCGGCGCCCGCCGCTGGCCTGTCCGATCCGAACGCTTGGCGGCAGGGAGGACAAGGCCAGCGAGGAACAGTTGCTGGCCTGGGCC GAGGAAACCCGCAGCGGTTTCGAACTGGAACTGTTCGACGGCGGGCACTTCTTCATCCATCAGCGCGAGGCCGAGGTGCTGGCGGTCGTCGAGCGCCAGG TCGAGGCCTGGCGCGCGGGGCAGGGCGCCGCGGCGTTGGCGGTGGAGTCGGCGGCGATCTGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCCCGCGAGGGCGCCATAGGCCCTGCGGCGGGTCCGATGTCGACGAAAAAAAGGCCGGTGAGCAGCGCTCCCCGGCCTTTTTCGTTACGAGGCGCGGCT CAGCCTTTACCGGCCAGCAGCCCTTCGACTATCGCTTTCATGTCGCTTTCCAGGCCGGCCACCGGGTCCGCCGCCTCGGTGTCCACCACTACCAGGCGTG CGCCGCTGGCGGCGATGGCATCGGCGAGGGGCTTGGGTGGCTGGCGATGGTGCAGGACCAGGGCGATATCCTCGCTCTTCAGCTCCTCGGCGAAAGCCTG GATATTGGTCTCGGTCCAGCCGTCGTCGGCCTGGATCTCCACGTCCAGCGGGTCCAGGTTGAGCCCGGCGAGCAGGTAGCCGAGGCGTTCGGAGAGGCTG ATCACGCTGAGGTTGTCGGCCTTCGCCAGGCGAGTCTCGTTACTGGCGGTCGCTTCCAGCAATTGCTTCTTCAGCGTCGCCAGGTTGGCCTGGATGGTCG
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Amino Acid Sequence |
>putative thioesterase
MGGTPVRLFCLPYSGASAMTYSRWRRKLPAWLAVRPVELPGRGARMAEPLQTDLASLAQQLARELHDEVRQGPYAMLGHSLGALLACEVLYALRELGCPT PLGFFACGTAAPSRRAEYDRGFAEPKSDAELIADLRDLQGTPEEVLGNRELMSLTLPILRADFLLCGSYRHQRRPPLACPIRTLGGREDKASEEQLLAWA EETRSGFELELFDGGHFFIHQREAEVLAVVERQVEAWRAGQGAAALAVESAAIC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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