Pseudomonas aeruginosa PAO1, PA1119 (yfiB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCTTCTTCGAAGGCCGCCTGAGCCGGGCGCTGCGCGATGCCAACGAGCATCGCGAGCAATTGGCGGTGCTGTTCATCGACAGCGACCGCTTCAAGGAG ATCAACGACCGCCTCGGCCATGCCGCCGGCGACACCGTGCTGGTCAACATCGCCATGCGCATCCGTGGGCAGTTGCGCGAAAGCGACCTGGTGGCGCGCC TGGGCGGCGACGAATTCGCCGTCCTGCTCGCACCGCTGGCGTCCGGCGCCGACGCCCTGCGCATCGCCGACAACATCATCGCCAGCATGCAGGCGCCGAT CCGGCTCAGCGACGGCAGCACTGTGAGTACCTCACTGACCATCGGCATCGCCCTCTATCCCGAGCATGCGGATACCCCGGCGGCGCTGCTCCACGACGCC GACATGGCGATGTACATCGCCAAGCGCCAGGCCCGCGGCAGCCGGCGCCTGGCGGAACTCAACGACCCCCGCATCCTTCAGGAAGAAAAGGAGATAGACA
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| DNA Sequence for Gene |
>PA1119
|yfiB
GTGCTACCCCAGAGGCTCCACCCAAGTAGATTGCTCGCCCTCGCCCTGTTCAGCCTTGTGCTGGGCCTGGCCGGTTGCCAGACCAAGCCGCCGCAGACCG GCCTGAGCGCCGAGCAGATCGCCGTGCTCCAGGAGCAGGGCTTCGAACTCCGCGACGAAGGCTGGGAGTTCGGCATGTCGAGCAAGGTGCTGTTCGGCAA CAATCTCGACCGTCTCAATCCCGACAGCCGCAACACCCTGACCAAGATCGCCCGCGCCCTGCTCGCGGTAGACATCGACAAGGTCCGCCTGGAAGGCCAC ACCGACAACTACGGCGACGAAGGCTACAATCAAAAGCTCTCCGAACGGCGCGCCGAATCGGTGGCCGCGGTATTCCGCGAAGCCGGCATGCCGGCGGCCA ACATCGAGGTCCGCGGCCTTGGCATGAGCAAGCCCGTGGCCGATAACAAGACCCGCGCCGGCCGCAGCGAGAACCGCCGCGTCGCCATCATCGTTCCCGC CGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTGCGCTCGCGGGCTGCGTACGGCCCACCCGTACCTGGCCCGTCCATCGCCCGGCCCCGCCACTACCCCGCTTCCGGCCTATGTTGAAGGAAGAAGCC AGCAGACCGGCGTACCGGCCGCCGCTGCCGCGGATGCTAGACTGAATGCTGCGCAAGAAACCGACAATCCCGGCCGACCTGCCGCTTGCGGGTGCTCCGG GATTCACCGACAGGGGGTATCGACCTTTGCCTGTTCGCCCAAGGAACAGGCCGTCAGACGATGGGAGGCATGCCATGAACCGGCATTACTACATCAGCGA CAACCTCGACGAGCTGGAACGGCTCGAAGCCGAACTGGAAGCCAGCGGCATCGCCACCGAGCAGATCCACGTCCTCAGCGAAAAGGACGCGGAGACCGGC CAGCGCCATCTGCACGAAGTCTCTCCGTTCATGAAGAAGGATGTGGTCCGCTCCGGCCGTGTCGGCCTGCTGGTCGGCCTCGTCCTGGCCATCGTCGCCG
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| Amino Acid Sequence |
>YfiB
MLPQRLHPSRLLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLDRLNPDSRNTLTKIARALLAVDIDKVRLEGH TDNYGDEGYNQKLSERRAESVAAVFREAGMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIVPAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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