Strain | Pseudomonas aeruginosa C20 genomic scaffold adgfy-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCCGAGGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTTCCGCGTCGCCGAGCAA CTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCGGCATCAAGGCCTCGGGCCTGGGCCGCGAAGGCTCCA AGTACGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTGGGCGGTATCTGAGCCCGGCGAGAAACGCATCCGGAGGGGCCGGACGGCAGGCAAGA GCTGCGCCGTCCGGTGTCGACGTTGCCGGTGGTGGCACCGGACGAACCGGGAGTCGCGGTCGCCGATCGCGAAGCGGCTCCGAGCCCTGGCGGGCCTGCA AGTCCCGAGGCAGTCGATCATCGCATGCTGCCTTGGGGAGCTTCCTTCCCGCCTTCATCCTTTGACCCGGCCGACCCGATGAGCGGCCACTGAGGAAGCC
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DNA Sequence for Gene |
>Q085_00298
ATGAGCAAGACCAACGAATCCCTGCTGAAGCGTCGCCAGGCCGCGGTACCCCGCGGCGTGGGCCAGATCCACCCGGTCGTCGCCGAGCGCGCCGAGAACT CCACCGTCTGGGACGTGGAAGGCCGCGAGTACATCGACTTCGCCGGCGGCATCGCCGTGCTGAACACCGGCCACCTGCATCCGAAGGTGATCGCCGCGGT CCAGGAGCAACTGGGCAAGCTGTCCCACACCTGCTTCCAGGTGCTGGCCTACGAACCCTACATCGAGCTGGCCGAGGAAATCGCCAAGCGTGTGCCGGGC GACTTCCCGAAGAAGACCCTGCTGGTCACCTCCGGCTCCGAAGCCGTGGAGAACGCCGTCAAGATCGCCCGCGCCGCCACCGGCCGCGCTGGCGTGATCG CCTTCACCGGCGCGTACCACGGCCGCACCATGATGACCCTGGGCCTGACCGGCAAGGTGGTCCCGTACTCCGCCGGCATGGGCCTGATGCCGGGCGGCAT CTTCCGCGCCCTGGCGCCCTGCGAGCTGCACGGCGTGAGCGAGGACGACTCCATCGCCAGCATCGAGCGCATCTTCAAGAACGATGCCCAGCCCCAGGAC ATCGCCGCGATCATCATCGAGCCGGTGCAGGGCGAGGGTGGCTTCTACGTCAACTCCAAGTCCTTCATGCAGCGCCTGCGCGCCCTGTGCGACCAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAGACCGGCGCCGGCCGTACCGGCACCTTCTTCGCTACCGAGCAACTGGGCATCGTTCCTGACCTGACCACCTT CGCCAAGTCGGTCGGCGGCGGCTTCCCGATCTCCGGCGTGGCCGGCAAGGCCGAGATCATGGACGCCATCGCGCCCGGCGGCCTGGGCGGCACCTATGCC GGCAGCCCGATCGCCTGCGCCGCGGCACTGGCCGTGCTGAAGGTGTTCGAGGAAGAGAAGCTGCTGGAACGTTCGCAAGCCGTCGGCGAGCGCCTCAAGG CCGGCCTGCGCGAGATCCAGGCCAAGCACAAGGTGATCGGCGACGTTCGTGGCCTGGGTTCGATGGTGGCCATCGAGCTGTTCGAGGGCGGCGATACCCA CAAGCCGGCCGCCGAGCTGGTCAGCAAGATCGTCGTCCGTGCGCGCGAGAAGGGCCTGATCCTGCTCTCCTGCGGCACCTACTACAACGTCATCCGCTTC CTCATGCCCGTCACTATCCCCGACGCGCAACTGGAGAAGGGCCTGGCCATCCTGGCCGAGTGCTTCGACGAACTCGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTTCACCGGCAAAGCGATACCCCCGAGGCCCGCGCGTCCGCGCGGGCCTTTCTTTCAGAGGCTTCACGGAAACGGAAGCCTCTTTTTTCTGCCAGGGTT TTCCGCGAAACGCCCGACGAACGGTTTTCCCCTGTTACCCTTGGGCGCCTGGCGCATACGAATCCTCCCGCATTCCTCCGGTCGTACCGTTCGAGGCGAT TAGGACAGGTCCTAGAGGCGCACCGTGTTCGCCCGTCATACCCTTGTGTGCCCGCGGGCTGTGTCGTACCCGCCTGTCATGCCTGGTGCGGCCTGCTCGG TTCGCCAGGTTCGAAGAGGAAAGCCATGAGTGCCGCGAAAAAGGCCCCCGTCATCCTGATTGCTGATCCGGACCCCTGGAGTCGCGACTTGCTTGGCCAA CTGGTCCTCGGCGTGCGTTGCGATGCCCGGCTGGTCCTCTGCGGCGATGGCGGGGAAGCGCTGGAACATTGCCGGCGCCGGCGCTTCGCGTTGATCCTGG
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Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLLKRRQAAVPRGVGQIHPVVAERAENSTVWDVEGREYIDFAGGIAVLNTGHLHPKVIAAVQEQLGKLSHTCFQVLAYEPYIELAEEIAKRVPG DFPKKTLLVTSGSEAVENAVKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALAPCELHGVSEDDSIASIERIFKNDAQPQD IAAIIIEPVQGEGGFYVNSKSFMQRLRALCDQHGILLIADEVQTGAGRTGTFFATEQLGIVPDLTTFAKSVGGGFPISGVAGKAEIMDAIAPGGLGGTYA GSPIACAAALAVLKVFEEEKLLERSQAVGERLKAGLREIQAKHKVIGDVRGLGSMVAIELFEGGDTHKPAAELVSKIVVRAREKGLILLSCGTYYNVIRF LMPVTIPDAQLEKGLAILAECFDELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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