Pseudomonas aeruginosa C23, Q086_05673
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF00015
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004888 | transmembrane signaling receptor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 536 | 578 | - |
| FunFam | G3DSA:1.10.287.950:FF:000001 | Methyl-accepting chemotaxis sensory transducer | - | - | 327 | 657 | 1.5E-79 |
| Coils | Coil | Coil | - | - | 463 | 483 | - |
| Pfam | PF00015 | Methyl-accepting chemotaxis protein (MCP) signalling domain | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 469 | 622 | 3.7E-41 |
| PANTHER | PTHR32089 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB | - | - | 71 | 656 | 7.0E-92 |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 423 | 452 | 2.3E-6 |
| SUPERFAMILY | SSF58104 | Methyl-accepting chemotaxis protein (MCP) signaling domain | - | - | 358 | 657 | 2.35E-66 |
| CDD | cd11386 | MCP_signal | - | - | 423 | 620 | 2.97865E-49 |
| Gene3D | G3DSA:1.10.287.950 | - | - | - | 327 | 657 | 1.0E-68 |
| SMART | SM00283 | MA_2 | IPR004089 | Methyl-accepting chemotaxis protein (MCP) signalling domain | 395 | 656 | 3.1E-60 |
| Coils | Coil | Coil | - | - | 183 | 203 | - |
| PRINTS | PR00260 | Bacterial chemotaxis sensory transducer signature | IPR004090 | Chemotaxis methyl-accepting receptor | 522 | 551 | 2.3E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.