Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGGTTCCAGGAGGAACTGGTCATCGAGCAGGTGCGCAACCTGCGCAGGGACGCGATCATCGTGCGCAACCCCGATTTCGACCGAACCAATACCTTGCAG AGTATCCACCGGGTTTCGCGTTATCTCGACCGGCGCTTCCTCGCCGTGGATGGCGACACCTTCATCGAGAATCGCTCGTTCGAACGCTTTCTCCGCGCCG CCGCCGGGCAGGCGGGCCTGATCGGCGTCTCGCGCTACACCACCAGCGATGGCGTGCGCGTTCTGCTGGATGCGGGTGGCGAGGCGGTCACCGCTTTCAC CCGCGAGCCGCAGCACGCCTACGAATGGACGGGTATCGCGATTCTCCGGCCGGACATGGTGGTGGACCGGCCGATATACGTGTACCAGGCGCTCGAACCG TACCTGCCGCTGCCCGCGCAGGAACTCGACGCCTTCGACATCGATACCGCCAGCGACCTGGATATGGCGCGGCGCGTGCACCTGAATAACTGGAACCTGA
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DNA Sequence for Gene |
>PA1091
|fgtA
ATGATTGAGGACAGCGTGAGCGAACCCGACCGGCGCGACGGCGGGGATGCCGGGAAACGATTGGCCTGGCTGCAGCGGCAGGTCTTGCCGGTGCTGGAGG AGGGGGGCGCGGTCTGGGTTTCCGGGCTGGACGGCGCGCCGTTCGCCGGGGGCGCACACAAGGTCGTCGAGGCTTCCGTCGCTGGCGAGCTGCCTGGCAA CGAGCGTTTCCGCCTGGCTTGCCTGGGCGGGGCGGTGGGAGGCGTGGCGGACGACTGGCAGGCCATGCGCCTGCTCCTGCGCGCGGTGGAGAGCCTGGAG GATCGCGGCTGGCTGCTGCTGGAGGAGGCTCTCTCGGTATCCGCCGCAGGCGCTTGCCGGAGTCCCCAGGCGCAGGCCCGCCTGGCGCTTTCCCTGGGCT TGCGGCAGGTCGCGGAACTGCGCCTGGGCGCGCCGGACGACGGCGGACGCCAGCGGGTGCTGCAACTGTTCCGGCAGGACCTGGCGGTTGCGCGCATGCA GCGCTACTCGGGCCTGAGGGTCGCCTGTTACGGCAACATGCCTTTCCACTACCGCTCGTTGCGTCCTTTGGCCGAGTGTTTCGAGGACAGCCTCCTGAGC CTCGACATCGATGAAGTCATGGCCTGGAAACCGGACGTGATAGCGGTGGCCGACGGCTGGTCGGTGGAGTTCTGGCGCGACTACTGCGATGCGCACAACG TATTGCTGGTCGGCATGCGCCATGGCTCGGTCACCCGCTACGGATTCGCCGAGGGCACCTACCGCTACGCCGACTATCTGTGCGGCAGCGCATGGGACAT CGACGACACCCTGGCTTCCTCGGTGATGCCGCGCAACGGTTTCCTGCTGACCGGCAACGCCTGGTGCGACGAGGTGTTCCGGCTGCCCGCGAGAACCCCG GCGGAGAACGCGCCGACCATCCTCTTCGCCCCCACCTACAACCCCGAGATCAGCGCCGCCGTCCACCTCGGCGAGCGTGTGGTGGCATTGATCCGCAAGG TCTATCCCGCGTCGCGGATCATCATCAAGCCGCATCCCGCCATCGTCCAGCACGAACATGCGTTCGTCAGCGACAAGGATCTGTTCCGCGACCTCATGAA GCTCTGGCGCGAACAGTCACGCACGGACCCGCTGGTCACTCTGGTGGACGACCCCGAGGCGAGCATCGCGGCCAGCTTCGCCGAAGCCGACATTCTGCTG GCGGACCGTTCTTCGCTGATCTTCGAGTTCATGACGCTCGACCGACCGATCCTGCTGTTCTCCCGCGAACAGCGGATCGCCCGCTGGGCCTACAACCCGG AGGCTCCAGGGAACGCCTGGCGCGATATCGGACTGGAGTTCGCCGACGACGAGCAACTGCTCGACCTGCTGGCCAATGCCTTTACCCGGCACGCGGAGAG TCGCGATACCCAGGAGAACCGCACGCAGCAGCTGTACGGCCGGTTTCGCGACGGACGCAGCGTCCAGAGGGTCGCCGCAGCGATCGCCGAGGCGCCGCGC TTGCAGATCGTGCTCGACGCGCGGGCCGCTGCGGATGGCGGGCAGCGCCTGGCCGAACATTATGCGGCCTGCTTCGCCCATCGCCGTATCGACCTGATCG CTCCGTCCGGCGCGGCATTGCCGGCCGACGTGCGGCGCTTCGATTCGTGGCGGGCCTGGTGCGACGCGGAGGCTGCCACGCTCGAACGCAGGGCTTCGGC GGTGCTTCTGGTGGAAGACGACGGCCAGTTGCTGCCGGGCAGCGCGCATCAGGTAAGCGCGCTCCTGCCGGCCATCGCCATGGGCCAGTTGCGGCATGCC CGGCTGGCGTTGGAGGAGCGCGAGGCCGGGCCCGCTGGCGAAACCGACTGGAGCGCCCGCCGCCTGCACAGGTTGCTCGCGCGCCTGCAGCCGAAGCCGG CCTGGCGTCTGCTGGCGCCCGCGCTGTTGCGCGAGGAACTGGCCGACCTGCCGGACGAAGCGGAGCAGCCGTTGTGGCTGCGCGCCGTGGCGGCAGCCGA GGCGCCGGTCGAATGGCCCGTCGGGCAGTTGAACCTGTTCGCCGAAGAGGGACTGTTGCGCCAGGGCGACGTGCATATGCTCTGCGCGCGCGCTCGGCTG CGCGCGGTTCCTTGCGTGTCGGGCCTGCCGCTGCGCCAGCGCCAGGTCGTCCTGCAGGTCACGCCCTTCGCCAGCCAGCTTTACGACCGTTTCCCGTTCC AGTTGCGCGTGTGCCTTAACGGCCAGCTCTTCAGCCGCGTGAGCGTCGAGGACGCGCGAGCGAAGTCGCTGGTCCTGCCGTTCCGGGGTGACGAACGCGG TGGCATGACGATCGAACTGGAGTGCGACGGCAGCTATCCGGCTTTCGAAGGCGTTTCCACGCCGGTCTCCCTGCTGCTCCAGACCGCGTTCCAGCCGGCG CCGGGAGACTATTGCGCGGCCCTCGCGGCCGGCGCAGCGAGCCCGGAGGCGGGGGAGGACCTCCGCAGCGAATACGAGACCTGGCTGCACGGGCGCGAAG TGGAGCCGGCCCGCTACCGTCCCTTCATCGACGCTTTGCGACGCGACTCGCGGATCGAAGTCCTGGTGCTTGCCGAGGAGGCCGAGGACGCAGACCTCCA GCGCAGCCTGGCGAGCATCGACGGCCAGGCCTTGCCGGCCTGGCGCACGCGGATACTGGGCAGAGCCCCGGCGTTTGCGCGCAAGGGCCTGGCGTGGCTG GCCGAGGGTGGTTCCGCCGCCGAGCGGATCAACCTGGCGGCGGCCGCCAGCGACGCCGACTGGCTGATCGTCATCCATGCCGGAGACGAACTGGCGCGTT CCGCGTTGCTCCTGCTGGCGGAAAAGATCCGTACGGAAACCGCGCTGCTGTGCTGCTACAGCGATGAAGACCATGTGTGCGACGGACGCTACGAGGCACC GTTGCTGAAGCCCGACTTCAACCTCGACCTTCTGCGCAGCTACCCCTACTGCGGTCGTTCCCTGGCCTTCCAGCGTGCCGCCTTGCTGGCGCAGGGCGGC TTGCAGGAAGGCTTCGGCGATCTGGCGTTGCAGGACTTCATGTTCCGCCTGGCGGAGCGGGAGGGCCTGGATCGTATCGGCCATCTCGCCGAGGTCCTCT ACCACAGCGCTCGCGCCTTCGGAGAATGGCTGGCGAGCGCCGCCGTGCGCCCGTTCATCGCGAGCGTGGTTGACGAGCACCTGAACCGCCTCGGGGTTCC GCATCGAATCGAGCCGGGCCGGCTGGCGGTGATTAACCGCATCGCCTACGACTATCCGGGGACGCCGGCAGTGTCCCTGCTGCTTCCCGTGGGAGACAGC CTGAGCGCTCTCCAGCGCAGCGTGGAAAGCTTCCTGGAGAACACCGACTACCCGTCCTACGAATTGCTGCTGGTCGCCTCCGGCCCGCTGGCGCCCGACA TGGCCGCCTGGCTGGAGGCGGTCCAGGGACTGGGGAGCGAGCAGATCCGGGTGCTCAGCCCGCAGGCTTCGAGCCTGGCCGGGTGCCTCAACCTCTGCGT GGCCGAGGCCCGAGGCGAATTCCTCCTGTCGTTGGGGGCGGGGGTCGTGGCCCTTCGTCCGGACTGGTTGCGCGAGTTGCTCAACCACGGCCGCCGCCCG GAGGTCGGGGCGGTCGGCGGCAAGCTCCTGGGCCTGGACGGAACGATTCGCGAGGCGGGCCTGGTGCTTGGCCTGGGCGGCACGGCGGGCCGCGCGTTCG CCGGCGAGGCGGGAGACAGCGCCGGCTACATGCATCGCCTGCTGGTCGTCCAGAATCACACGGCTCTGTCGGCTTCCTGCCTGTTGTTCAAGCGCTCGCT GCACGACGAACTCGGCGGCTTCGACGAGAACGACTTCGCTCATGGCCACGCCGACGTCGATTTCAGCCTGCGTGCCCGCCAGCTCGGCTACCTGTCGGTG TGGACGCCCTATGCAATCCTGGCCCAGAACGGAAACGTCGAGCTGCCTTCCGTGGAGGCCGATGAGTCGCTCTACCGGCGCTGGCTACCGGCATTGGCGC GGGATCCCGCGTACAACCGCAATCTCAGCCTGGAGGGGGCCGGGTTCGCCCTGGAGCGCCCCGAGGTACCGGCCTGGCAACCGCTGTTCGGACGGTCGCC GCTGCCGCGGGTCCTGGCGCATCCTGCCGATCCCTACGGTTGTGGCCACTATCGCGTGCGTCAGCCGTTCCGCGCGCTGCACGACGCCGGCCTGCTGGAC GGCATGCTCAGCGAGTCGCTCCTGCAGCCGGTGGCGTTGGAGCGCCTGGAGGTCGACAGCGTGATTCTCCAGCGGCAGATCAGCGAAGAGCAGTTGCGGG CCATTTCCCGGATGCGGTCGTTCAACCGCGCCTTCCGGGTCTACGAACTGGACGACTATCTGCCCGAGCTGCCGCTGAAGAGCCTGCATCGGGCCGAGAT GCCCGGCGACATTCGCCAGATCCTCGGTCGTGCCCTGGGCCTGGCGGACCGTTTCGTGGTCTCGACCGAACCGTTGGCGGAGGCATTCCGGCGCATGCAC GGGGACATCCGGGTCGTGCCGAACCGCCTTCCGTTGCCCTGGTGGCGCGACCTTTCCAGTCGGCGCCGGGACGCAGAGCGGCCACGGGTCGGATGGGCCG GCGGGATCGGCCATGGCGGCGATCTCGAGGTGATCGCCGAGGTCGTGCGCGAGCTGGCGGACGAGGTGGACTGGGTGTTCTTCGGATTCTGCCCGGATGC CTTGCGTCCCTATGTGCGCGAATACCATCCGGGGGTGGAGATCGAACGCTATCCCGCCTACCTGGCCAGCCTCGACCTTGATCTCGCCCTGGCGCCGTTG GAGCAGAACCGCTTCAACGAGTGCAAGAGCAACCTGCGCCTCCTGGAGTACGGCGTGCTCGGCTTCCCGGTGATCTGCAGCGACGTGCTTTGCTATCGCG ACAGTCTCCCGGTCACGCGGGTGAAGAACCGTTCCAGGGACTGGCTGGAGGCGATCCGCGCGCACCTGGCCGATGCAGACGCCAACGCCGCGGCCGGCGC GCAGTTGCGCGAGGCGGTGCGCCGCGACTGGATGCTCGAAGGCGCGCATCTCGAGGCATGGGCGGCAGCCTGGCTGCCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCCGGGTTTTTCTCGAACGAGGCCGGTGGCGCAAGCCATCGGCCTTTTTTCATGCCCGGCGTGCCCTGTTGCACGGGAGGGCTAAAGAAAATCGCCGGG GGGTCGATGCAATGGGTGTCGGAACTTCCACCCTCTGCCGGACCAACCGGGGGCGGTTCAGGACCGATATTGGCGAGTCCTCTTCGAAGCATGTAACCCA CTGAAGAGGAAGAGAAAAAGAAAATGTTGATTTTTTCTCTAAAGCTCCGCCGGGAAACGCCGATAAACACCATGAACGCGAATTCTTGGGGCACCTGAGC AAGCAGGCCGAGAGATCGCAAGCTCAGGTAACCGAAATAGGTCCTTTGGAGGAAATCACCATGGCCCTTACAGTCAACACGAACATTGCTTCCCTGAACA CTCAGCGCAACCTGAATGCTTCTTCCAACGACCTCAACACCTCGTTGCAGCGTCTGACCACCGGCTACCGCATCAACAGTGCCAAGGACGATGCTGCCGG
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Amino Acid Sequence |
>flagellar glycosyl transferase, FgtA
MIEDSVSEPDRRDGGDAGKRLAWLQRQVLPVLEEGGAVWVSGLDGAPFAGGAHKVVEASVAGELPGNERFRLACLGGAVGGVADDWQAMRLLLRAVESLE DRGWLLLEEALSVSAAGACRSPQAQARLALSLGLRQVAELRLGAPDDGGRQRVLQLFRQDLAVARMQRYSGLRVACYGNMPFHYRSLRPLAECFEDSLLS LDIDEVMAWKPDVIAVADGWSVEFWRDYCDAHNVLLVGMRHGSVTRYGFAEGTYRYADYLCGSAWDIDDTLASSVMPRNGFLLTGNAWCDEVFRLPARTP AENAPTILFAPTYNPEISAAVHLGERVVALIRKVYPASRIIIKPHPAIVQHEHAFVSDKDLFRDLMKLWREQSRTDPLVTLVDDPEASIAASFAEADILL ADRSSLIFEFMTLDRPILLFSREQRIARWAYNPEAPGNAWRDIGLEFADDEQLLDLLANAFTRHAESRDTQENRTQQLYGRFRDGRSVQRVAAAIAEAPR LQIVLDARAAADGGQRLAEHYAACFAHRRIDLIAPSGAALPADVRRFDSWRAWCDAEAATLERRASAVLLVEDDGQLLPGSAHQVSALLPAIAMGQLRHA RLALEEREAGPAGETDWSARRLHRLLARLQPKPAWRLLAPALLREELADLPDEAEQPLWLRAVAAAEAPVEWPVGQLNLFAEEGLLRQGDVHMLCARARL RAVPCVSGLPLRQRQVVLQVTPFASQLYDRFPFQLRVCLNGQLFSRVSVEDARAKSLVLPFRGDERGGMTIELECDGSYPAFEGVSTPVSLLLQTAFQPA PGDYCAALAAGAASPEAGEDLRSEYETWLHGREVEPARYRPFIDALRRDSRIEVLVLAEEAEDADLQRSLASIDGQALPAWRTRILGRAPAFARKGLAWL AEGGSAAERINLAAAASDADWLIVIHAGDELARSALLLLAEKIRTETALLCCYSDEDHVCDGRYEAPLLKPDFNLDLLRSYPYCGRSLAFQRAALLAQGG LQEGFGDLALQDFMFRLAEREGLDRIGHLAEVLYHSARAFGEWLASAAVRPFIASVVDEHLNRLGVPHRIEPGRLAVINRIAYDYPGTPAVSLLLPVGDS LSALQRSVESFLENTDYPSYELLLVASGPLAPDMAAWLEAVQGLGSEQIRVLSPQASSLAGCLNLCVAEARGEFLLSLGAGVVALRPDWLRELLNHGRRP EVGAVGGKLLGLDGTIREAGLVLGLGGTAGRAFAGEAGDSAGYMHRLLVVQNHTALSASCLLFKRSLHDELGGFDENDFAHGHADVDFSLRARQLGYLSV WTPYAILAQNGNVELPSVEADESLYRRWLPALARDPAYNRNLSLEGAGFALERPEVPAWQPLFGRSPLPRVLAHPADPYGCGHYRVRQPFRALHDAGLLD GMLSESLLQPVALERLEVDSVILQRQISEEQLRAISRMRSFNRAFRVYELDDYLPELPLKSLHRAEMPGDIRQILGRALGLADRFVVSTEPLAEAFRRMH GDIRVVPNRLPLPWWRDLSSRRRDAERPRVGWAGGIGHGGDLEVIAEVVRELADEVDWVFFGFCPDALRPYVREYHPGVEIERYPAYLASLDLDLALAPL EQNRFNECKSNLRLLEYGVLGFPVICSDVLCYRDSLPVTRVKNRSRDWLEAIRAHLADADANAAAGAQLREAVRRDWMLEGAHLEAWAAAWLPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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