Pseudomonas aeruginosa PAO1, PA1048
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAAGATGAACTGCTGGGCCAGTTGGCCCACGAACACGCGGTAGGCGAGGATCGGACCTTGCTGACCCGGACCCGCTTCGGCCTCGGCACCATGCTCGAC CAACCGGGCGTGGCCAATGCGACCTACGGACTCGGCCCCAAGGCCTTCGGCCACCCTGGGGCGGGTGGCTCGATCGGCTTCGCCGATCCCGAGCGCGACC TGGCTTTTTCCTTTGTCAGCAACGCCTTGGGGCCGTATGTGCTGATGGATCCGCGGGCGCAGCAGCTGGCGCGTGTCGCGGGGGAGTGTCTGTAATCCGT TGGTTAACTTTTAACCGCTTGTCGGCTCGACGCTAAATTTCATTGCCAAATAATGGCTTAGCGACACAATCTAAAGCGTCGTATGAGATAGGGCGTTGCC GGGGCAGTGGATCGACTCCGGCATCGCTGCGATGTGACCGGCGGTTGAGCCGAACGTTCCATCGGGCTCGCCTTCTTTCACTTCCAACGGACCCCGACGT
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| DNA Sequence for Gene |
>PA1048
ATGAAACTGCTTAAGACCTCGACGCTTCTTCTCTGCATGACCGCCTCCGGCTGCAGCTATTTCCAGACCCAGGACGCTTCCTCGCAGCCAGCCAAGGCTC CGGCCGAGCAGGCTTCCAGCCATTCATGGTGGCCGTTCGGCAAGGACGACGGACAGACCGTCGCCAAGCAGGCCACGGAACAGAAGGCCGAAGCCGAGCA TGTCGGCTCCAGCCACTGGTGGTGGCCGTTCGGCAAGGACGAAGGCGGTCGGGACGTAGCCGCCAAGGCTGCGGAGCAGAAGGCCGAGATCGCCGCGGCG AAGAAAGAAGTCGCCGCCGCAGCCGAGCCGAAGGCCGCCAACCCCTGGTGGTGGCCGTTCGGCGCCAGCTCGGCGAGCAAGGCGTCGGGCAAGCCGGCAC TGGTCCAGCAGAAGGTCACCAAGGAGTGGCTGGATGCCCATGAGAAAGCCCTGCGCGAAGCGATCGCCGGTAGCGAGTTTACCCTCGAACGCCGCGACAA CGCATTGATCGTCATCGCCCCCGCCGACTACTCGTTCAATCCCAAGCGCCACACCATGCTGATGCCGATCACCCTCAACCCGCTGGGCAAGGTCGCCAAG ATGGCCCAGGCCGATCCGCAGAGCGGTATCCTGGTACTCGGCCATACCGACAGCACCGGCAGCAAGGCGGTCAACGACAAGCTGAGCTTCGAGCGTGCCC AGTCGGTGGCGGCGATCTTCCGCCTCAGCGGCCTGAAAGGCGACCAATTGCGCCTGAAGGGGGTCGGTTCCGACATGCCGCGCGCGGACAACGCCAGCGC CGCCGGCCGCGCCCAGAACCGTCGCGTCGAAGTGCTCTATACCCAGCGCGCCAGCCTGCTGTCCCTGGCCCAGGGCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGAACCGGGGCAGGGCGCTTGGCGCCATTGTCCCGGATCAAGCGCGAGGCGGAGTCTGCGGTTAAGCTATGGCGCATTTCCCCCTGGAGATGCGCCAT GACCCAGTCCCTGGCCGATATGCGCCGCGAGTACACCCGCGATGGCCTCAGCGAGGCCAACGCCCCTAGCGATCCCTTCAGCCTGTTCCGCCAGTGGTTC GACGACGCGGTGAAGACCGAGCGCCTGCCGGTCGAACCCAACGCCATGACCCTGGCCACCGTCGACGCCGACGGCTATCCGCATTGCCGTATCCTCCTGC TCAAGGGCCTCGACGAGCGCGGCTTCACCTTCTTCACCAACTACGAAAGCGCCAAGGGCCGGCAACTGGCGGCCAATCCGCGGGCGGCCATGACCTTCTT CTGGCCGGCGCTGGAGCGCCAGGTGCGCATCGAAGGCAGCGTCGAGAAGGTCACTCCCGAGGAATCCGACGCCTACTACCAGGTGCGTCCGCTGGGCAGT
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| Amino Acid Sequence |
>probable outer membrane protein precursor
MKLLKTSTLLLCMTASGCSYFQTQDASSQPAKAPAEQASSHSWWPFGKDDGQTVAKQATEQKAEAEHVGSSHWWWPFGKDEGGRDVAAKAAEQKAEIAAA KKEVAAAAEPKAANPWWWPFGASSASKASGKPALVQQKVTKEWLDAHEKALREAIAGSEFTLERRDNALIVIAPADYSFNPKRHTMLMPITLNPLGKVAK MAQADPQSGILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAGRAQNRRVEVLYTQRASLLSLAQGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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