Strain | Pseudomonas aeruginosa C23 genomic scaffold adggj-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATCGCGGCAAGGGGCGCGAGTCGGTGGCCTGGAACTCGGCGCTGACCTACGACATGATCTTCACCCAGCCGGTGGTCTACGAACTGGACCGGTTGCAGA TGCCGACCCTGCTGCTGATCGGCGAGAAAGACAACACCGCCATCGGCAAGGACGCCGCGCCGGCGGAACTGAAAGCCAGGCTGGGCAACTACGCGCAACT GGGCAAGGACGCCGCCCGACGGATTCCCCAGGCGACCCTGGTGGAATTCCCCGACCTTGGCCATACCCCGCAGATACAGGCTCCGGAACGCTTCCACCAG GCACTGCTGGAGGGTCTGCAAACCCAGCCCTGAACCATCCACCGGCGGCGCTCTCGCCATCGGCTTCGCCGCGCCTTGCCCGGCGTCAACACCGATGCCT GCCGCCGGCGTTTCACTGCACTGGCTGCGCGACGACGCGTGGCTCGCGTCGCGCAGGCCCGCCCACGCCGCGGCCGTTCCCATCCACATGGAGGTTCATC
|
|
DNA Sequence for Gene |
>Q086_02045
GTGTTCCCTTGCCTACCCCGTTCGCTACTCGCCGGCGTCCTGCTGGCGAGCGCCCTGCCCGCTCACGCGGAGCTGCCCCACGCGCCCGCCTACATCGATG ACAGCGCCTACCCGGCCGCGGCCCGCCAGCGCATCCTGCCACCGATGTTCGAGCAGAGGCTGGGCAGCCTGCGCTACCTCGCCAAGCCCGGCGACCCCTT GATCACCCAGGCCGAGAGCAGCGACTTCCAGCGTACCAGCGACTACCGCGAGACCCGCGCCTACCTGGAGAAACTGGTAGCCGCCTCCTCCGGCCGCATC GCCCTGCGCGAGTTGCCCGAGCGCAGCGCCGAGGGTCACCCGATGCTGCTGGTGACCGCCTCCACCGAGGCCGACAAGTCCGCCGCCGGCCTGAAGCGCT CCGCCAAGCCGACCTTGCTGGTGGAAGCCGAGATCCATCCCGGCGAGGCCAACGGCAAGGACGCCATGTTCATGCTGCTGCGCGACATGAGCGCTGCCGA CCGCCCGCTCGCCGGGCTGCTGGAGAAGATCAACCTGCTGTTCATCCCGGTGGTCAACGTCGACGGCGACCTGCGCCGCAGCGCCTACGGGCGGATCAAC CAGAACGGCCCGCAGGAGACCGGCTGGCGGGTGAACGGCCGCAATCTCAATCTCAACCGCGACTTCACCAAGCTCGACAGCGCGGAGATCCGCAACGTCG CCTGGGTGTTCAACCACTACGAGCTGAGCTTCTTCGCCGACACCCACTCCACCGACGGCGCCATGTATCCCTACGACAGCTCCTACTGCCACAATGGCAA CGGCTGGTCACCGGCGAGCAGCGCCTGGATGGACCAGGTCATGCGCAAGCCGGTGTACCAGGCGCTGGAAAGCCTCGGGCACATGGTCCATGAATGCATC AGCCTGAACGACAACCAGGATCCGACCCAGGGCTACTACCCCTACCGCACCGACCTGGCGCGCTTCTCCAACCAGTACGGCGACATCCGCAACGTGCCGT CGATCCTCATCGAGCAACACGCCCTGCATCCGTACAAGACCCAGGTGCTGGGCAACTACGTGATGCTCAAGGCGATGTTCGAGGTGATCGGCGAGCAGGC CGCCAGCCTGCGCCAGGCCATCGCCAGCGACCGCGAGCGCCTGCTGCGGCAGAAGGAGGTGATCCTCACCTGGAAGCCGGGCGAGGCCGCCGAGACGCCG TTCGTGGTCGGCGACTACCGCTACGAGCAATCGCCGGTCACTGGGGCCCGCACCATCGTCTGGAGCAACCGGCCGAAGACGCTGAAACTACCGGTGACCG ACAACGGCGTACCCGACCTGGTGGTGCCGCGTCCCCAGCGTTTCATCGTCCCGGCGCAGTGGCACGAGGTGATCGCCCGGATCAAGGCCCATGGCATCCG CTATAGCACCCTCGAGCGTCCGACCGAAATCGCCGTGACCCTGTACCGCATGGACGACATCAAGCTCGCCGATGGCTTCGAACCGGATCGCGTGCAAGGC AACCGGATTCCGGGCTACGAAGGTCGCCTGCTGGTCAGCGGCACGCCGAAGCCGTTCCAACGCTTGCAGACCTTCCCGGCCGGCTCGCTGTCGATCGACA CCGCCCAGCCGCTGGGCGTCCTGGCCATCGACCTGCTGCAACCGCAGAGTCCGGATTCCTTCTGGTCCTGGGGCTTCTTCAATTCCACCCTGGTGGCCGC CGAGGAGCCGGAGGAATACGTGATGGAGCCGATGGCGCGCAAGATGCTGGCGGAAGACCCGGCGCTGAAGTCCGCCTTCGACAAACGCCTGCGCGAGGAC AAGGCCTTCGCCGCCGATCCGCAGGCGCGCCTGCAATGGTTCTACCAGCGCACGCCGTTCTACGACGTGAACGCCTTCGTCTATCCGGTAGGAGTGGTGT TCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCCCTCCTGGGGCTGACGGCGGATAACGCTGCGCGTTATCCGCCCTACCGCTGGGCTTCGGGAGCCCCGTTGCCTCTCCCGCTTGCGGGAGAGGGCTGG GGAGAGGGAGCCGGTCTCAGGTACCGTCGGTGGGTGTGGGCAGGTTGCTTCTCGGCTTGCGCTTGCGCCTGGGTTTCGGTGGTTTTTCGGGTGGCGGCGA CAACTCCCGCTTGCGCACCTTCTTGAGGATTTCCCGATGCTTCTCGCGCCAGGCCGGCACGTCGAGACCGTGGAGTTCGAGCAGCTCGGGGTTACGCTCC ACCAGATAGACCGCCGCTTCCTGGGCGGCCTCGGCGATCTTCCAGGCGATCGACTGCGGTTCGATGCTGCCTTCATAGGCGATCCAGTCGCTGAACTCCG GGAAGGTCCCGCAGACCTTCTCGAAATCCTCGTCGTGCATGCGCTGCCGGCCACTCTCGATGTTCTCAAGGCGTTTGGGATCCATGCCGACCACCTCGGA
|
|
Amino Acid Sequence |
>carboxypeptidase
MFPCLPRSLLAGVLLASALPAHAELPHAPAYIDDSAYPAAARQRILPPMFEQRLGSLRYLAKPGDPLITQAESSDFQRTSDYRETRAYLEKLVAASSGRI ALRELPERSAEGHPMLLVTASTEADKSAAGLKRSAKPTLLVEAEIHPGEANGKDAMFMLLRDMSAADRPLAGLLEKINLLFIPVVNVDGDLRRSAYGRIN QNGPQETGWRVNGRNLNLNRDFTKLDSAEIRNVAWVFNHYELSFFADTHSTDGAMYPYDSSYCHNGNGWSPASSAWMDQVMRKPVYQALESLGHMVHECI SLNDNQDPTQGYYPYRTDLARFSNQYGDIRNVPSILIEQHALHPYKTQVLGNYVMLKAMFEVIGEQAASLRQAIASDRERLLRQKEVILTWKPGEAAETP FVVGDYRYEQSPVTGARTIVWSNRPKTLKLPVTDNGVPDLVVPRPQRFIVPAQWHEVIARIKAHGIRYSTLERPTEIAVTLYRMDDIKLADGFEPDRVQG NRIPGYEGRLLVSGTPKPFQRLQTFPAGSLSIDTAQPLGVLAIDLLQPQSPDSFWSWGFFNSTLVAAEEPEEYVMEPMARKMLAEDPALKSAFDKRLRED KAFAADPQARLQWFYQRTPFYDVNAFVYPVGVVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|