Strain | Pseudomonas aeruginosa C23 genomic scaffold adggj-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACCTGCTCGCCGGGCTGCTCACCGGCATGGGCAAGGACGGCGCGCGCGGGCTCCTGGCGATCCGCCAGGCCGGCGGCTACACCCTGGCCCAGGACG AGGCTACCTGCGTGGTCTACGGCATGCCCCGCGAAGCGGTGGAACTGGGCGCCGCGGAAGACGTGCTGCCGCTCGAACGGATCGCCGCCGCGCTGCTCCA GCAAGCCGCCCGGCGCGGCAGCGGCAACCGCCTCTGAGCGGGATCCTGGCCGGCCCGCTGCGCTTTTTCGCCGCCCCCCCGCAACCTCCCCCGCCGAGAC CCCGCCGACGACAGGCCCGAACCACGGGCCTTTGCCTGCTCGCCATCATTGTGACGTCAAATTAATGGCGAAATAAAACCAAATTACGTTGCCTGAAATA ATGCACATCTGCACAATTGGCCCTTTCGCCAAAAGTTCGACACACGCTTTCGATCCATGATTTCGGCCGCGGGCCGGGCGAGAAACTGATAGGGATAGCC
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DNA Sequence for Gene |
>Q086_00174
ATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTGGTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGA TGGACGACATCCGTACGCACTTCGGCCTGGCCTACGCGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTT GTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGACTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTAC CGCGGCGACTTCCGCGACCACGCCTACTTCATCATCGCCAGCGGCTCCCAGCACTACTACTTCAACGACGGCCGCCAACCCTACAGCGAACGGCCGCGCT ACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGTACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGCTGAA CCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGACCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTC ATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATCGTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCG CCGGCGGCGCCAGCGAACGCCACCGGGTGTTCGACCTGCTCGACCAGCCGGAACAGCGCGACGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGC CGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGGCCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTC GACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGGCTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATG CCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCCTCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCA GGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAGCATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAG GCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCGCAGAAGAAGATCGGCGACAGCCTCGACTATGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACC GCCAGCTCAGCGCCACCCTCGGCGAGCATCACTTCATCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGACCGACGG CTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGGCGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTG GGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACCGACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGG ATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCCAGCTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACGCCAGCGACGGCGAGGAGGTCCAGGAACT CAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCGTGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACCGAC GGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTCGGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGC AGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACCAGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCACCCATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGAT CGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAG AACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCG CCGGCAACCTGGTGGAACGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGA GCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTG
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Amino Acid Sequence |
>histidine kinase
MAANWGLRGKSVVALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGY RGDFRDHAYFIIASGSQHYYFNDGRQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDF IIAREPGVTPMIVGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAV DLHAAQVLDNRWLWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQ ALEEANREMAAAQKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQTDGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAV GSRDPAAILGETDQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTD GFLDQAGGEHGFGFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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