Strain | Pseudomonas aeruginosa C23 genomic scaffold adggj-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACTTCCAGCAGGTCGGCGGCATCGAGTGCTATCCGGTCACCGGCGAGATCACCTACGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGACTCGG TCTACGACCTGGTCTGGACCGACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAACGAGGTGGAGCAATCCACTTTCAACTTCGAGCA CGCCAACGTGCCGAAGCTGTTCGAACTGTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATCGCGCTGGAGCTGCCGTTGCCGACCTACGAGATGGTC CTCAAGGCTTCGCATACCTTCAACCTGCTGGATGCGCGGCGCGCCATCTCGGTCACCGAGCGCCAGCGCTACATCCTTCGCGTGCGTACCCTGGCCCGCG CCGTGGCGCAGAGCTACCTGCAGGCCCGCGCGCGCCTCGGCTTCCCCATGGCCACCCCCGAATTGCGTGACGAAGTACTGGCCAAGCTGAAGGAGGCCGA
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DNA Sequence for Gene |
>Q086_00008
ATGATGAGCGCCAAGGATTTCCTGGTCGAACTGGGCACCGAAGAGCTGCCGCCAAAAGCCCTCAACAGCCTCGGCGAAGCCTTCCTCAGCGGTATCGAGA AGGGCCTCAAGGCTGCCGGTCTGAGCTATGCCGCTGCGCGTTTCTATGCGGCGCCGCGCCGTCTCGCCGTGCTGGTCGAGCAACTCGCCGTGCAGCAGCC CGACCGTACCGTCAACCTAGACGGTCCGCCGCTACAGGCCGCCTTCGACGCCAGCGGTAACCCGACCCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGC GTGGATCTGCAGCAGATCGACAAGAGCGGTCCGAAGCTGCGCTTCAGCCAGACCATCGCCGGCCAACCGGCCGCCGGCCTGCTGCCGGGCATCGTCGAGG CCTCGTTGAACGAACTGCCGATTCCCAAGCGGATGCGCTGGGCAGCTCGCCGCGAGGAGTTCGTGCGTCCGACCCAATGGCTGGTGATGCTGTTCGGCGA CGACGTGGTCGAGTGCGAGATCCTCGCCCAGAAAGCCGGGCGCGAATCCCGTGGCCACCGCTTCCACAATCCGGACAATGTGCGTATTTCCAGCCCGGCA GCGTATCTGGAAGACCTGCGCGGCGCTCATGTGCTGGCCGATTTCGCCGAGCGCCGCGAGCTGATCGCCAAGCGCGTGGCCGAACTGGCCGCCGAGCAAC AGGGCAGCGCCATCGTGCCGCCGAGCCTGCTCGACGAAGTGACTGCACTGGTCGAGTGGCCGGTGCCGCTGGTCTGCTCCTTCGAGGAGCGCTTCCTCGA GGTCCCGCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAATACTTCTGCCTGCTGGACGCCAACGGCAAGCTGCTGCCGCGCTTCATCACCGTC GCCAACGTCGAGAGCAAGGCGCCGGAGAACATCGTCAGCGGTAACGAGAAGGTGGTTCGCCCGCGCCTCACCGACGCCGAGTTCTTCTTCAAGCAGGACA AGAAGCAGCCGCTCGAAAGCTTCAATGAGCGCCTGCGCAACGTAGTGTTCCAGGCCCAGCTCGGCACCGTGTTCGAGAAGGCCCAGCGCGTCTCCGGCCT GGCCGCCTACATCGCCGAACGTATAGGCGGCAATGCGCAGAACGCCGCGCGCGCCGGCATCCTGTCCAAGTGTGACCTGGCGACCGAGATGGTCGGCGAG TTCCCCGAAATGCAGGGCATCGCCGGCTACTACTACGCCACCCACGGCGGCGAAGCGGAAGACGTCGCCCTGGCCCTCAACGAGCAGTACATGCCGCGCG GCGCCGGCGCCGAGCTACCCTCGACCCTGACCGGCGCCGCCGTGGCGGTGGCCGACAAGCTCGATACCCTGGTCGGTATCTTCGGCATCGGCATGCTTCC CACCGGCAGCAAGGACCCCTACGCACTGCGCCGCGCTGCGCTGGGCGTGCTGCGCATCCTCATCGAGAAGCAGCTCGACCTGGACCTGGTAGCCGCGGTC AACGCCGCCGTCGAGCAATACGGCGACAAGGTCAAGGCCGCCGGCCTGGCCGAGCAGGTGCTGGACTTCGTGTTCGACCGCCTGCGCGCGCGCTACGAGG ACGAAGGCGTGGACGTGGCCGTGTACCAGTCGGTGCGCGCACTCAAGCCAAGCTCGCCGCTGGACTTCGACCAGCGCGTACAGGCCGTCCAGGCCTTCCG CCAGTTGCCTGAAGCCGAGGCCCTGGCCGCGGCGAACAAACGGGTGTCGAATATTCTCGCCAAGTCCGAGGACGAGGTTCCGCCTAACGTGGATGCCAGC CTGCTGGTGGAAGCCGCCGAGAAGGCCCTGGGCAGCGCCGTGGCGAACGCCGAAAGCGAAGTCGCGCCGCTGGCAGCGGCACGCGACTATCGCGCCGCGC TGGCCCGCCTGGCGGCCTTGCGCGAGCCGGTGGATACGTTCTTCGCCGATGTGATGGTCAATGTCGACGACGCGGCGGTGCGCGCCAACCGCTATGCGCT GCTGGCCAAGCTGCGCGGGTCGTTCCTCGGGGTGGCGGACATCTCGCTGCTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAGTCCCGCCTCGAAGAAAAGGCCCGGCGTCCTCGCGACACCGGGCCTTTTTCACTACAGGACCTTCAGATACTCCAGCAGCGCGCGCTTCTCCTCGG CCGACAGGCTGGTGCCGTACTCATGGCCGCAGCGGCTGTTGCCGGAATCACGCTGCTCGCAGCCGGTGGTCTTCAGCACATAGCTGCCGAATTGGGTCTG CTGGGCGGCGAGGCCGACCTTGTCCACGTCGTAGGCCGAGCCCACCGGGAAGGATTCCACCCGCTCCGCGGCCGGCTTCAGCAACTCTTCCAGGGTCGGC ACCGAGCCGTTGTGCAGGTACGGCGCCGCTGCCCAGATCCCCTGCAGGACCCGCGACTCGTAGGGGTAGGGGTCGGCCTGGGTACGCACCGGCTTCTGGA AGGCGGTCAGCAGTTGCCGGGTTTCGTCGGTCATCACGCTTTCCGGCTTGACCGCCGCCGCCTTGGCATCGTGCTTCTCACCGAGGATCGGCACGAAGTG
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Amino Acid Sequence |
>glycyl-tRNA synthetase
MMSAKDFLVELGTEELPPKALNSLGEAFLSGIEKGLKAAGLSYAAARFYAAPRRLAVLVEQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCG VDLQQIDKSGPKLRFSQTIAGQPAAGLLPGIVEASLNELPIPKRMRWAARREEFVRPTQWLVMLFGDDVVECEILAQKAGRESRGHRFHNPDNVRISSPA AYLEDLRGAHVLADFAERRELIAKRVAELAAEQQGSAIVPPSLLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITV ANVESKAPENIVSGNEKVVRPRLTDAEFFFKQDKKQPLESFNERLRNVVFQAQLGTVFEKAQRVSGLAAYIAERIGGNAQNAARAGILSKCDLATEMVGE FPEMQGIAGYYYATHGGEAEDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLVAAV NAAVEQYGDKVKAAGLAEQVLDFVFDRLRARYEDEGVDVAVYQSVRALKPSSPLDFDQRVQAVQAFRQLPEAEALAAANKRVSNILAKSEDEVPPNVDAS LLVEAAEKALGSAVANAESEVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYALLAKLRGSFLGVADISLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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