Pseudomonas aeruginosa C40, Q087_05048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAATGAAGAGCCCGGCGAACGCCGGGCTTCTTCATTTCTTTCCTTGTGCTTTTTCGTTCTTTGATAAGAGCGGAAAATTATTTTTACTTATAAATAAAA AATACTCCTCTCGAAATACTGCAACACTTCCCTGGAAAGTCGCGGCGGTTTTTCGACGGACCGTCAACAAGCCGGCGACCACCCACCTGAAAGTCAGAAT ACCGTCTCGCGAAATTCATTGATCGGCATCAACGATCCGGCTTGATCCGCGGGTTATAGCCCGATTTCGAGCAATTTCAAGCTTTCCCCGTAGCGGATGG CAAGTCTTCCCCTAACACATGAAAAAACCGCCCTATTCCGGGCAGGTCTTAGATTCCTCTTCTATCTTTGGCACTCGCGACTTACAGGAATGCGTCATCT AATTACTTTGAGTAGGAAGCTATTGACGTGGATCAGCATTCAACAATAGCCGCTGCCGCCTAATGTCTTCACTCTCAATTCCTATAGGGAGATTCCGAAA
DNA Sequence for Gene
>Q087_05048
ATGTCCCAAGAATCCAGCCAAAAACTCCGACTAGGAGCGCTAACGGCTCTGGTTGTCGGCTCGATGATCGGAGGGGGCATCTTCTCCCTCCCGCAAAACA TGGCAGCCAGCGCCGACGTCGGCGCCGTCCTGATCGGATGGGCGATCACCGCCGTCGGCATGCTCACCCTCGCTTTCGTCTTCCAGACCCTCGCCAACCG CAAGCCCGAACTCGACGGCGGCGTGTACGCCTACGCCAAGGCCGGCTTCGGCGACTACATGGGTTTCTCCTCGGCCTGGGGCTACTGGATCAGCGCCTGG CTGGGCAACGTCGGCTACTTCGTCCTGTTGTTCAGCACCCTCGGCTACTTCTTCCCGATCTTCGGCAAGGGCGACACCGTCGCGGCGATCGTCTGCGCCT CGGTCCTGCTCTGGGCCCTGCACTTCCTGGTGCTGCGCGGGATCAAGGAGGCGGCGTTCATCAACACCGTCACCACCGTGGCCAAGGTCGTGCCGCTGTT CCTGTTCATCCTGATCTGCCTGTTCGCCTTCAAGCTGGACATCTTCACCGCCGACATCTGGGGCAAGAGCAACCCGGACCTGGGCAGCGTGATGAACCAG GTGCGCAACATGATGCTGGTCACCGTCTGGGTGTTCATCGGCATCGAGGGCGCGAGCATCTTCTCCTCCCGCGCGGAAAAACGTTCCGACGTCGGCAAGG CCACCGTGATCGGCTTCATCACCGTCCTGCTCCTGCTGGTGCTGGTCAACGTGCTGTCCATGGGCGTGATGACCCAGCCGGAACTGGCCAAGCTGCAGAA CCCGTCGATGGCGCTGGTACTCGAGCATGTGGTCGGCCACTGGGGCGCCGTGCTGATCAGCGTCGGCCTGCTGATCTCGCTGCTGGGCGCGCTGCTCTCC TGGGTGCTGCTGTGCGCCGAGATCATGTTCGCCGCCGCCAAGGACCACACCATGCCGGAGTTCCTGCGCCGCGAGAACGCCAACCAGGTGCCGGCCAACG CCCTGTGGCTGACCAACATCTGCGTACAGGTGTTCCTGGTGGTGGTGTTCTTCACCTCGGGCGACCCGGACGGCATGGACCCGTACACCAAGATGCTGCT CCTGGCCACCTCGATGATCCTGATCCCGTACTTCTGGTCCGCCGCCTATGGCCTGCTGCTGACCCTGAAGGGCGAGACCTACGAGAACGATGCCCGCGAA CGCAGCAAGGACCTGGTCATCGCCGGCATCGCCGTGGCCTACGCGGTCTGGCTGCTCTACGCCGGGGGCCTGAAGTACCTGCTGCTGTCCGCCCTGCTGT ATGCGCCCGGCGCGATCCTTTTCGCCAAGGCCAAGCACGAGGTCGGCCAGCCGATCTTCACCGGAATCGAAAAACTGATCTTCGCCGCAGTCGTCATTGG CGCCCTGGTGGCTGCCTACGGCCTCTACGACGGTTTCCTCACCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTACTCCACTGGAGACGTGAAATGAGCACGGAAAAAACCAAACTTGGCGTCCACTCCGAAGCCGGCAAACTGCGCAAAGTGATGGTCTGCTCGCCCGGAC TCGCCCACCAGCGCCTGACCCCGAGCAACTGCGACGAGTTGCTGTTCGACGACGTGATCTGGGTGAACCAGGCCAAGCGCGACCACTTCGACTTCGTCAC CAAGATGCGCGAGCGCGGCATCGACGTCCTCGAGATGCACAATCTGCTGACCGAGACCATCCAGAACCCGGAAGCGCTGAAGTGGATCCTCGATCGCAAG ATCACCGCCGACAGCGTCGGCCTGGGCCTGACCAGCGAGCTGCGCTCCTGGCTGGAGAGCCTGGAGCCGCGCAAGCTGGCCGAGTACCTGATCGGCGGCG TCGCCGCTGACGACCTGCCCGCCAGCGAAGGCGCCGACATCCTCAAGATGTACCGCGAGTACCTGGGCCATTCCAGCTTCCTGCTGCCGCCGTTGCCGAA
Amino Acid Sequence
>amino acid APC transporter
MSQESSQKLRLGALTALVVGSMIGGGIFSLPQNMAASADVGAVLIGWAITAVGMLTLAFVFQTLANRKPELDGGVYAYAKAGFGDYMGFSSAWGYWISAW LGNVGYFVLLFSTLGYFFPIFGKGDTVAAIVCASVLLWALHFLVLRGIKEAAFINTVTTVAKVVPLFLFILICLFAFKLDIFTADIWGKSNPDLGSVMNQ VRNMMLVTVWVFIGIEGASIFSSRAEKRSDVGKATVIGFITVLLLLVLVNVLSMGVMTQPELAKLQNPSMALVLEHVVGHWGAVLISVGLLISLLGALLS WVLLCAEIMFAAAKDHTMPEFLRRENANQVPANALWLTNICVQVFLVVVFFTSGDPDGMDPYTKMLLLATSMILIPYFWSAAYGLLLTLKGETYENDARE RSKDLVIAGIAVAYAVWLLYAGGLKYLLLSALLYAPGAILFAKAKHEVGQPIFTGIEKLIFAAVVIGALVAAYGLYDGFLTL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site