Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCATCCGCATTTCGATCCGCACCCGGACCATGTCCGCGCCCAGGAGGCTGTGCGCGAGGCGCTCCAGGGCCTGGACTGGCAGCCGCAGGCATTGTTGCA CTATGCCAATCACCTGCACGACAACGATCGCTGGCCGATGGGCGATGCGCACATGGGGGTCAGCCTGCCACCGCTGACCGAAGAATGCTCGCCGCTGCTG CCATGGACGCTGGCGCTGGAGCGCACGCGCCAGGTGGACAAGGCCATGGCCTTGGGCATGATGCACGACCTGCAACCCAGGCCGCCGTTCAAGCGCCGTC TGCGCCGCCGTCTGCAGGGCTGGCTCGCCGGGCGTCGCTGGCCGGCATACGGCGAGGACGAGTTCATGCGCAAGGCGGTGCGTCGGCACGAGTTGTTCTG GGTGGAGTCGCTGGATGGGGAGGCGTGATGCTTGGGTCGAGCGTTCGGCAAGGTTCGAGCCGCCATGCTGCTTCGGAGAAGCCGCGAGGATGAAGGTCTG
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DNA Sequence for Gene |
>Q087_04874
ATGAAAGTTCTGTTTCTGGTCCAGAAAGAGCAGCGCGCGATCCTGGATCGCCTGTACGACGGCATCGCCGCCCATTGCGAGTGCGATACCCGCTGGCTGA GCAGCGAGGAGCAGGCCGACCTGCGCGGCTACTTCCGCAAGCACGTGGATGTCTCGCGCTACGACCGCATCCTGTTCTTCCTCCGTTTCAAGAAGGAAAT GCGCCAGGTCCGCTTCATCCGCAGCGTGCCCAACCTGGTGATCCTCGAGCACGATGCCTACCAGAACTACATTCCCTGCAAGTACACCGGCAAGTTCAGC GCCCATTACCGGCGCCTGCCCTGGGCACGGGTGATCAGTTCGGGCCATACGGTCAGCGAACGCCTGCGCCAGGAGGGATTCGACGCGGTATTCGTGCCCA AGGGCTACGACCAGACCCTGTTGCATGACCTCGGCCTGGCGCGCGATATCGAGCTGGGCTTCGTCGGCAGTACCGGCAGCGTGGCCTACAGTGGACGCAA GGCGCTGCTCGACGAGTTGGGCGGAGTGGAGAACCTGCTGGTGACCAAGACCAAGTCCGGCGAGGAGTACCTGCGCACGCTCAACCGCATCCGTTTCTTC GTCAGCGCGGATGTCGGCATGGGCGAATACATGATCAAGAATTTCGAGGCGATGGCCTGCGGTTGCGTACTGCTGGCCTACGACCAGGGCGAGCGGGAAA ACGAGGCCTTGGGTTTCCGGGACATGGAGAATATCGTGCTGTATCGCTCGGTGGCGGACATCCAGGAAAAGCTCGCGATCCTGCGCCTCGATACGGCTCT CGCCGAGCGGATCGCGCGAAGCGGCCAGGCGCTGGCCATCGAACGATTCAGCTTCGCCGCTGTCGGTCAGAGTATCGTCGAGGCCATGCGGCCCGCGTTG CGCGAGCCGGAGCGTCCCGAATGGCTGGAGAAGACCTGGCGACGTATTTTTACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGTAGCAGCCGAAAAGAGCTGGGGCTTCAGGCGTGTTTGCTATTGTTCAGCTTGTTTTTCCGGGCTGGGGGGAGGTGTAGGACCGATGAAGATCGCAGG ATCGCTCATGCATGTCTGGCGCTTTGAATGGGGACGTGAAGGACAGATAAGGTTGTAGCTATGGCGCTCGTCGATGATGGTTCGCAGCCATTGGTTTCCG TGATCATCGCTTCCTATAACCACGAAAAGTATATAGAAGCGAGCATCGCCAGCGTGGCTGCGCAGACATACCGCAACGTGGAACTGCTGGTGGTGGACGA TGGTTCCAGCGATGGCAGCGTCGAGCTTTTGCGCGGGCTCCAGGCGAAGTACGGCTTCGACCTCAGGGTCCAGCAGAACCAGGGACTGTCGAGAACGCTC AACGAGGCGATCGCCAGGGCCCGGGGAAATCTCATCGTGCCTTTCGGTTCGGACGACATCATGTTGCCGCAACGCCTGGAGAAACAGGTGGCACACATGT
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Amino Acid Sequence |
>hypothetical protein
MKVLFLVQKEQRAILDRLYDGIAAHCECDTRWLSSEEQADLRGYFRKHVDVSRYDRILFFLRFKKEMRQVRFIRSVPNLVILEHDAYQNYIPCKYTGKFS AHYRRLPWARVISSGHTVSERLRQEGFDAVFVPKGYDQTLLHDLGLARDIELGFVGSTGSVAYSGRKALLDELGGVENLLVTKTKSGEEYLRTLNRIRFF VSADVGMGEYMIKNFEAMACGCVLLAYDQGERENEALGFRDMENIVLYRSVADIQEKLAILRLDTALAERIARSGQALAIERFSFAAVGQSIVEAMRPAL REPERPEWLEKTWRRIFT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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