Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGGTACTGGAAAGCCGCATCACCGGCAACGTCATCGAACAGACTCGCTTGCAGAACGCCGCCGAGTCCGGACTCCGCGAAGGCGAGCGGCGCTTCGTCA ACACCCTGCGTCCGCCGGAGCCCGGCACCGGTTGTACGGCCGACAACGTGGCCCGCCCCTGCCTGCTGGACCTCGCCGCGCTGAACCTGAAGCTGGCGGA CACCCACCAGAATCCGGTCGGCGTGCTGAAGGGCATCGCCAATACCTGGATGAGTTACCGCGGCAGCGACATCAGCAGCGCGACCACCGCGGGCACGCTC TACAGCGTGCAGTGGAACAACCTGCCCATTCCCTCGGGCGGCCAGGTCAACGAAGCGGAAAGCCCCGAATACGGCAACCTGATGCGCGGCATCGGCACCT TCTACTACGAGACCAATAGCGTCGCGCGCAACCAGACCAACAGCGAAACCGTCCTGCAGACCGTTCTCGCCCGTCTCTATACCAACTGATCGAGCCTCGC
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DNA Sequence for Gene |
>Q087_04390
ATGAAATCGGTACTCCACCAGATCGGCAAGACCTCGCTGGCAGCCGCGCTCAGCGGCGCCGTCCTGCTCTCCGCCCAGACCACCCACGCCGCCGCCCTGT CGGTCAGCCAGCAGCCGCTGATGCTGATCCAGGGCGTCGCCCCGAACATGCTGGTGACTCTCGACGACTCGGGCAGTATGGCTTATGCCTATGCACCGGA TAGCCTGGTCAACAGCCGCAACAACGTCTATTTCGCGTCGAACAGCTACAACCCGATGTACTTCGACCCGAATACCCAGTACAAGCTGCCGAAAAAGGTG ACCCTTTCCAATGGCCAGATCCAGGTGCAGGACTATTCCAAGCCCAGCTTCACCGCGGCATGGCGCAACGGTTTCACTCAGGAAGGCCGGGTAAACCTTT CCCGTGACTACAGGCCAACGGTGCAGTACCAGGGCGGATCGGGAGCAGGCACCGAGTCCAGCATCGACTGGTACGGGGCTCCTGCCTTCTACTACCAATA CAGCGGGGGCCGCGGTTGCAGCCTCACCACTTCGAGTTGCTACACCCGTGTGGAAATCAGCGGCGCGGCCCAGCAGCAGAACTTCGCCAACTGGTACTCC TTCTATCGTACCCGCGCCCTGGCCACCCAGACCGCCGCTAACCTGGCGTTCTACAGCCTGCCTGAAAACGCCCGGATCAGTTGGCAACTACTGAACAGTT CCTCGTGCCTGATCGGCAGTGGCTCCAGTAACTGTTACAACAACTACCTGAGAGACTTCACCGGGCAACATCGGGTGAACTTCTTCAACTGGCTGGAGAA CCTGTCGGTCGGAGGTGGTACTCCGCTGCGTCAGGCCATGACTCGAGCAGGGGAGTTTCTCAAGAAGACCGGCGTCAACGGCCCCTATGCCTATCGACCT GGTACCCAGACCTCGCCGGAATACAGCTGCCGTGGCAGCTATCACATTCTGATGACCGATGGTCTTTGGAACAACGACTCGGCCAGCGTAGGCAATGCCG ACAGCACGAGTCGTAGCCTCCCCGATGGCAAGAGCTACAGCAGCCAGACGCCTTACAGGGATGCTGCGTCCAATACCCTGGCCGACCAGGCCTTCCATTA CTGGGCCACCGATGCCCGGCCGGATATCGACGACAATATCAAGCCGTACATTCCCTACCCGGACCAGGCCAATCCCTCGGCGGAGTACTGGAATCCGCGC AACGATCCGGCGACCTGGCAGCACATGGTGACCTATACCCTGGGCCTGGGCCTGACCACCAGCCTCACCAGCCCGAAGTGGGAGGGTTCCACCTACTCCG GCGGCTATGACGAAATCGCCGCCGGGCGCCTCAGCTGGCCGAACGCTTCGAATAACCATAGCAACAACGTCTATGACCTGTGGCACGCCGCAGTGAACTC CCGGGGCGAGTTCTTCAGCGCCGACTCGCCGGACCAACTGGTCGCGGCCTTCCAGGACATCCTCAACCGAATTTCGGGCAAGGACCTGCCGGCATCCCGC CCCGCCATCAGCTCGTCCCTGCAGGAAGACGACACTGGCGACAAGCTGACCCGCTTCGCCTACCAGACCAGCTTCGCCAGCGACAAGAACTGGGCTGGCG ACCTGACCCGCTACAGCCTGACCACCCAGGACAAGGCCACCGTGCAGACCAAGCTGTGGAGCGCGCAGAGTATCCTCGACGCGATGCCCAACGGTGGAGC TGGCCGCAAGATCATGATGGCCGGATCCGGTACCTCGGGCCTCAAGGAGTTCACCTGGGGCAGCCTCAGCGCCGACCAGCAGCGGCAGTTGAACCGCGAT CCGGACCGCAACGATGTCGCCGACACCAAGGGCCAGGACCGAGTGGCCTTCCTGCGTGGCGATCGCAGCAAGGAGAACAGCGACAACTTCCGCACCCGCA ACTCGATCCTCGGCGATATCATCAACTCCTCGCCGGCGACGGTCGGCAAGGCCCAGTACCTGACCTACCTGGCCCAGCCGATCGAGCCCAGCGGCAACTA CTCCACGTTCGCAGAAGCACAGAAAACCCGTGCCCCGCGGGTATACGTCGGCGCCAACGACGGCATGCTGCACGGTTTCGATACCGACGGTAACGAGACC TTCGCCTTCATCCCAAGCGCGGTCTTCGAGAAGCTCCACAAGTTGACCGCCCGCGGCTACCAGGGCGGCGCCCACCAGTTCTACGTCGACGGCTCGCCGG TGGTCGCCGACGCCTTCTTCGGCGGCGCCTGGCATACCGTGCTGATCGGCAGCCTGCGCGCCGGCGGCAAGGGTCTGTTCGCCCTCGACGTGACCGACCC CGCCAACATCATGCTGCTCTGGGAAATCGGCGTGGACCAGGAGCCCGACCTTGGCTACAGCTTCCCCAAACCCACGGTCGCCCGGCTGCACAACGGCAAG TGGGCCGTGGTCACCGGAAACGGTTATTCCAGCCTGAACGACAAGGCCGCGCTGCTGATCATCGACCTGGAGACCGGGGCCATCACCCGCAAACTGGAAG TCACCGGCAGGACCGGCGTACCCAACGGTCTATCCAGCCCTCGCCTGGCAGACAACAACAGCGACGGCGTAGCCGACTACGCCTACGCCGGCGACCTGCA AGGCAACCTCTGGCGCTTCGACCTGATCGCCGGCAAGGTCAACCAGGACGATCCGTTCAGCCGAGCCAACGACGGCCCGGCGGTGGCCTCGAGCTTCAGG GTGTCTTTCGGTGGCCAGCCGCTCTATTCGGCGGTCGACTCCGCCGGCGCGGCGCAAGCGATCACCGCCGCGCCCTCACTGGTTCGCCATCCGACACGCA AGGGCTACATCGTGATCTTCGGTACCGGCAAGTATTTCGAGAACGCCGACGCCCGGGCCGATACCAGCCGCGCCCAGACGCTCTACGGCATCTGGGACCA GCAAACCAAGGGCGAAGCCGCGGGCAGCACACCCCGACTGACGCGCGGCAACCTGCAGCAGCAGACCCTGGACCTCCAGGCCGACTCGACCTTCGCCTCG ACCGCTCGCACCATTCGCATCGCCAGTCAGAACCCGGTCAACTGGCTGAACAATGACGGCAGCACCAAGCAGTCCGGCTGGTATCTGGACTTCATGGTCA ACGGCACCCTGAAGGGCGAGATGCTGATCGAGGACATGATCGCCATCGGCCAGGTGGTGCTGCTGCAAACCATCACCCCGAACGATGACCCCTGTGCCGA CGGCGCCAGCAACTGGACCTATGGCCTCGATCCCTATACCGGCGGTCGCACCAGCTTCACCGTGTTCGACCTGGCACGCCAGGGCGTCGTGGACTCGAAA TCCGACTACAGCTACAACAAGCAGAACGTCGCGGTATCCGGTACCGAGCAGAAAGGCCTGGGAGGCTTGACGCTGAGCACCAACGAACAGGGCAATCCGG AAGTCTGCTCCTCGGGCGAATGCCTGACCGTGAACCCCGGTCCGAACACCCGTGGCCGCCAGAACTGGCGCCCCATCGAAGGAAAGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TATGAAAGTGCTGCCTATGCTGCTGGCCCTGGCCGTTCCCGGCCTCTGCTGGGCCGAAGATCCCCAGACCTTCGAAGGCGCTGGCGTGGTCTTCGAAGTC CAGGTCGAGAAGAACCTGGTGGACATCGACCACCGGCTCTACCACCTGCCCAACAGCACCGTCAGGAACGGCATGCCCAGCCTGTTTCAGGTCAAGCCGG GCTCCGTGGTGTCCTACTCTGGCACCGTCAGCCAGCCGTGGTCCACCATCACCGATATCTACATTCACAAACAGATGAGCGAACAGGAGCTGGCCGAGAT GATCGAGAAAGAACAGCCCCGCCAGGACGGGGAGGAGCAGCCCCGATGAGGACAAGACAGAAGGGCTTCACGTTGCTGGAAATGGTGGTGGTAGTGGCGG TGATCGGCATCCTCCTCGGCATCGCCATTCCCAGTTACCAGAACTACGTGATCCGCTCCAACCGCACCGAGGGGCAGGCGCTGCTCTCGGACGCGGCCGC
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Amino Acid Sequence |
>hypothetical protein
MKSVLHQIGKTSLAAALSGAVLLSAQTTHAAALSVSQQPLMLIQGVAPNMLVTLDDSGSMAYAYAPDSLVNSRNNVYFASNSYNPMYFDPNTQYKLPKKV TLSNGQIQVQDYSKPSFTAAWRNGFTQEGRVNLSRDYRPTVQYQGGSGAGTESSIDWYGAPAFYYQYSGGRGCSLTTSSCYTRVEISGAAQQQNFANWYS FYRTRALATQTAANLAFYSLPENARISWQLLNSSSCLIGSGSSNCYNNYLRDFTGQHRVNFFNWLENLSVGGGTPLRQAMTRAGEFLKKTGVNGPYAYRP GTQTSPEYSCRGSYHILMTDGLWNNDSASVGNADSTSRSLPDGKSYSSQTPYRDAASNTLADQAFHYWATDARPDIDDNIKPYIPYPDQANPSAEYWNPR NDPATWQHMVTYTLGLGLTTSLTSPKWEGSTYSGGYDEIAAGRLSWPNASNNHSNNVYDLWHAAVNSRGEFFSADSPDQLVAAFQDILNRISGKDLPASR PAISSSLQEDDTGDKLTRFAYQTSFASDKNWAGDLTRYSLTTQDKATVQTKLWSAQSILDAMPNGGAGRKIMMAGSGTSGLKEFTWGSLSADQQRQLNRD PDRNDVADTKGQDRVAFLRGDRSKENSDNFRTRNSILGDIINSSPATVGKAQYLTYLAQPIEPSGNYSTFAEAQKTRAPRVYVGANDGMLHGFDTDGNET FAFIPSAVFEKLHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGKGLFALDVTDPANIMLLWEIGVDQEPDLGYSFPKPTVARLHNGK WAVVTGNGYSSLNDKAALLIIDLETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGKVNQDDPFSRANDGPAVASSFR VSFGGQPLYSAVDSAGAAQAITAAPSLVRHPTRKGYIVIFGTGKYFENADARADTSRAQTLYGIWDQQTKGEAAGSTPRLTRGNLQQQTLDLQADSTFAS TARTIRIASQNPVNWLNNDGSTKQSGWYLDFMVNGTLKGEMLIEDMIAIGQVVLLQTITPNDDPCADGASNWTYGLDPYTGGRTSFTVFDLARQGVVDSK SDYSYNKQNVAVSGTEQKGLGGLTLSTNEQGNPEVCSSGECLTVNPGPNTRGRQNWRPIEGKN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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