Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGAAGCTGCTGGAACTGCACGCGGACATGCGGGTGGTGATCCTCACCGGCTATTCCAGCATCGCCACCGCGGTGGAGGCGATCAAGCGCGGCGCCTG CAACTACCTGTGCAAGCCGGCGGATGCCGATGACGTGTTGGCCGCGCTGCTCTCCGAGCACGCCGACCTGGACACCCTGGTGCCGGAAAACCCGATGTCG GTGGATCGCCTGCAATGGGAGCACATCCAGCGCGTGCTCGCCGAGCACGAGGGCAACATCTCCGCCACCGCCCGCGCCCTGGGCATGCATCGACGGACCT TGCAGCGCAAGCTGCAGAAGCGGCCGGTACGGCGCTGAAGCGTAAATGACAACGGGGGCGCCGCATGGCGCCCCCTATACTTTCCGCTTTCCGTCGAATC GCGGTGGATTTCGCACATTCCGCCGGTCGCCGGGGATATCCAGCGGACAGCGCAATCGTTAAGATGCAACTTTCATGAATCGCACGACCAGGGATTGATC
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DNA Sequence for Gene |
>Q087_04322
ATGCGTATCTTCGGTTCGAGTGCCGGCTGCCTGTCGGTGCTGTTCGGACTGGCCTTCGGGCTGCCTGCACTAGCCGAGCCTTCGGTGGACCTGGATGGTC CGACGGCAGGCTGGCGCTATTCCGGCCTGCTCGAGCAGCCCGATGCCCCGCGTGTCGCCTATCCGACTCCGCCCATCGATCGCGGCGGCCAGCGCGGCCG CAGCCTGATCGAAGGACACCTGCGCGAACTGGTCGGCACCGAGCGCGCCCAGCGCCTGGTGGTCAACGGCAATCCTCTCCCTCTCTATACCGACGGCGCC GGGCGCTTCGTCCGCCCCTATGCGTTCGGCCACGGCTCCAACGGCGTCCAGGTCGGCAGCGCCGACGGCAAGATCCTCAAGCGCGTACAGTTCTACGAGG CCAATCGCTCCCAACTGCCGCCGCGCGTGCGCGTGGTGCTGGGTTGGGACGATCCGAAGGCCGAGCTCGACCTGCATATCGTCACCCCCGATGGCCAGCA CGCCTACTGGGCGCATCCGCGCCTGAGCAACAGCGGCGGCCTCGATCCGGACGGCGTCGACGGGCCCGGCCCGGAGATGTTCACCATGGGCGCGCCGCTG CACGGCACCTACCTGATCTACGTGAACTACTGGGGCAACCTCAACAACCAGGGCTACAACTTCCAGGCCGGCAGCAACGTACAGGACGTGATCACCGCGC AGGTCAACCTGGTGTTCAACGAAAACAGCGTCGACGAGAAGCACGAGACCTTCGTCGTGCCCCTGCGCACCATTGGCGACCTGGTGCTGGTCAAGACCTT TACCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCATCCCCTCGTACGGATGACACGGGATTAGCGAACCATGAGCGAGAACAACACCCCCAGCCCTGCCAACGGAACCCCTGCGCCCGCCGCTGTGCGCAC CCGAAGCGCCCTGTGGCCGGTGCTGGGGATCGTCGCCGCGCTGGCCGCCGGCGGTGTGCTGGCCTGGCAGATGGGCTGGCTGGAGCGGCTCGGCGGAGGG CGCCCGGCCGAAGAGGACCTCGGCCAGCCGATCGGCGCCCAGGCACCCGCGGACGCCGGCGCGCCGCGTGCCTACCGTGACCTGCGCAAGCCCGACGCGC TGATCGAGAGCGTGTCGCTGAGCCGCCTGCCGAAGGAAATCCTCGAGGTGCCGTTGCTGCGCGATACCCTGACCGAGGACTTCGTCTTCTATTACGAGAA CAATGGCGACCGCCTCGGCCTGACCGGTACGTTGCGGCGGATCATCTACGAGCACGACCTGACCCTGAAGGACAGCCTGGTCGAGGAACTGCTCGACCAA
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Amino Acid Sequence |
>signal peptide protein
MRIFGSSAGCLSVLFGLAFGLPALAEPSVDLDGPTAGWRYSGLLEQPDAPRVAYPTPPIDRGGQRGRSLIEGHLRELVGTERAQRLVVNGNPLPLYTDGA GRFVRPYAFGHGSNGVQVGSADGKILKRVQFYEANRSQLPPRVRVVLGWDDPKAELDLHIVTPDGQHAYWAHPRLSNSGGLDPDGVDGPGPEMFTMGAPL HGTYLIYVNYWGNLNNQGYNFQAGSNVQDVITAQVNLVFNENSVDEKHETFVVPLRTIGDLVLVKTFTY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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