Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGACCGGCTGCAGCACCCAGAAGTCGAAATCGTGGACCCGATGGTAGTCGGCGGACTCGGGGAAATAGCGGTAGTAACGCTCGGCCGCCGCGGCGACCT CCTCCTCCGCCAATTGCCGCGCCTCGGCCAGTAGGGTGAGGCGGCCGACAGCCTGGATATCCTCGGCGCCGCGCTCGCCTACCAGCATCGAGCAGCGCGG GTCCGCCTGCAGGTTGTGGGTGTGCTGGGCGATCCGGCTGATCAGGATCAGCGGCCGGCCTTCGGCATCCAGGCAATAGGGAACCACCGAGCCGAAAGGA AAGCCCGGCCATTTCTTCGAGTGGGTGGAAAGGACCGCACGGTATTCCTTGAGCAGCAATTCTCGGGCATTCTTTGCAGCTTCAACGCTCAATTTATGAC TCCTTGCATAGAATCCGTCGTAAACGGACGGGCATATCAAAGTGCGTTCGCAGGTGCCGGCAAGGTCCGCTTCCAGAAACTGCTCGTGGGGTTCCAAGCA
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DNA Sequence for Gene |
>Q087_04218
ATGCAATTGAAAGACAAGGTCATCATCATCACCGGCGGCTGCCAGGGGCTCGGCCGGGCAATGGGCGAATATCTCGCCGGCAAGGGCGCCAGGCTGGCCC TGGTCGATCTCAACCGCGAACGTCTCGACGAAGCCGTCGCTGCCTGCAAGGCCGCCGGCGGCGACGCTCGCGCCTACGTGTGCAACGTGGCGGACGAGGA ACAGGTTACCCACATGGTGGCCCAGGTCGCCAGCGACTTCGGCGCGATCAACGGCCTGGTCAACAACGCCGGCATCCTCCGCGACGGCCTGACCATCAAG GTCAAGGACGGCCAGTTGAGCAAGATGAGCCTGGCCCAATGGCAATCGGTGATCGACGTCAACCTCACCGGTGTGTTCCTCTGCACCCGCGAAGTGGCGG CGAAGATGATCGAGCTGAAGAACGAAGGCGCGATCGTCAACATTTCCTCGATCTCCCGCGCCGGCAACATGGGCCAGGCCAACTACTCGGCAGCCAAGGC CGGGGTGGCCGCGGATACCGTGGTCTGGGCGAAGGAACTGGCGCGCTACGGCATCCGCGTGGCCGGCGTGGCGCCGGGCTTCATCGAGACCGAGATGACC GCCGGGATGAAACCCGAGGCGCTGGAGAAGATGACCGCCGGCATCCCCCTCAAGCGTATGGGCAAGCCGGTGGAGATCGCCCACTCGGTGGCCTACATCT TCGAGAACGACTACTACACCGGCCGCGTTCTCGAACTGGACGGCGGCCTGCGCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCCGGCCCCGCAAGGAAAAAGCCCCGCTATCGCGGGGCTTTTTCGTGCAGGCCGGCTTACCAGCCGACCCCGAGGCCGAAGGTATAGCGGCGCTGGTT GACGTTGCCGTCGTTGCCGCTGAACTTGTCCCATTCCGCCTTCATGCTCAGCGAAGCCCAGCTGGTCAGCTTGTAGCGGATCCCCGCCTCGGTCTGCAGC TCGTAGTCCAGGCCGGATTGCAGCGGCTTGCTGACCTCGCCGTTGGTGAACAGCTCGAACTGCTTGGCCAGCAGGTAGCGGTTGTAGTCCCACTTGAAGC TCGACGAATAGAAGTGCTCCTTCTCGCCATCGGCGAACTCGTAGTCGTTGCGGTTGACCAAGGTGGCGATGGAGAACGCGCCCAGCTCGTTGTCCCAGAA CTGGTAGCCGGGGCCGGTACCGACGGTACGCTTCTTCGCCAGGTCCTCGATCATGTCGCGCTTGTAGGCGACCTGGCCCTGCCAGAACCAGTGGTCGTCG
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Amino Acid Sequence |
>3-ketoacyl-ACP reductase
MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDEAVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFGAINGLVNNAGILRDGLTIK VKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSISRAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMT AGMKPEALEKMTAGIPLKRMGKPVEIAHSVAYIFENDYYTGRVLELDGGLRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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