Pseudomonas aeruginosa C40, Q087_03831
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGGCTGGGCAATTTCTCCCTGCCGCTGGCGCGCCGGGTGGCGCGGGTAGTCGGGGTGGAGGGCGTGGCGGCGATGGTCGAGCGGGCAGGCGCCAACGC GCTGGCCAATGGCCTTGGCAACGCGCACTTTTTCCAGGCCGACCTGTCCAAAGCGCTTGCCGAAGCGCCCTGGGCGGAGCAAGGTTTTACCGCTGTGCTG CTCGATCCGCCGCGCGACGGCGCGTTCGAGGCGGTACGCGAAATGAGTTCTCTGGGTGCCCGGAGGGTAGTCTATGTATCCTGCAATCCGGCGACCCTGG CGCGCGATGCTGGCGAAATGGCCAGGCAGGGCTATCGTCTGAAGCGCGCCGGAATCCTCGATATGTTTCCGCAGACCGCACATGTCGAGGCCATGGCTTT GTTCGAGGCAGGCTAGGATGCCTGCGTAATCCGACCAGCCCGTTCGAAGGCTGGCGCAGTCATCGGTGGGCTACGCGCACCGTGGTAAAGGGTAGGCAAG
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| DNA Sequence for Gene |
>Q087_03831
ATGGTACAGGTGAGAGCGCACCAGCCGGTCAACACCGACGGCAGTATCAACCTCGAGGCCTGGCTGGACCACGTCCAGAACCTCGTCCCCGGGCTCGATC GTCAGGGCTTGCTGGAGGCTTGCGAGTTCGCTCGCGAATCCGAGCAGCGAGCGATCGCCGCACAGAACTCCTGGGCGGAAGGCACGTCCAGCTTCCAGAC CGGACTGGAAATCGCCGAGATCCTCGCGGATCTCAAGCTGGATCAGGAGTCCCTGGTCGCCGCGGTCATCTATCGAGGCGTGCGGGAAGGCAAGATCACC CTGGAAGCGGTCAACAAGCATTTCGGGCCGGTGGTGGCCAAGCTGATCGAGGGCGTGCTGCGCATGGCCGCGATCAGCGCCAGCCTCAATCCGCGCCATT CCATGGTGCTGGGTACCCAGGCGCAGGTGGAGAACCTGCGCAAGATGCTGGTGGCGATGGTCGACGACGTTCGCGTCGCCCTGATCAAGCTGGCCGAGCG CACCTGCGCCATTCGCGCGGTGAAGAACGCCGACGAGGAAAAGCGCCACCGCGTCGCCCGGGAAGTCTTCGATATCTACGCGCCGCTGGCCCACCGCCTG GGCATCGGGCATATCAAGTGGGAGCTGGAGGACCTGTCCTTCCGTTACCTCGAGCCCGACCAGTACAAGCAGATCGCCAAGCTGCTGCACGAGCGCCGGC TGGATCGTGAGCAGTACATCGCCAACGTGATGAGCCAGTTGAAGGAAGCTCTCGCGGCCACCGGCGTACAGGCCGATCTCAGCGGACGGGCGAAACACAT CTATTCGATCTGGCGCAAGATGCAGCGCAAGGGCCTGGACTTCAGCCAGATCTACGACGTTCGCGCCGTGCGCGTGCTCGTTCCGGAGATGCGCGACTGC TACACCGCGCTGGGCATCGTGCATACCCTCTGGCGGCACATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAAAACGGCTATCGCTCGCTGC ATACCGCAGTTATCGGCCCCGAGGGGAAGGTGCTGGAAGTACAGATCCGTACCCACTCCATGCACGAAGAGGCGGAGCTCGGAGTCTGCGCGCACTGGCG CTACAAGGGGACCGACGTCAAGGCCAGCTCCAACCATTACGAGGAAAAGATCTCCTGGCTGCGCCAGGTGCTCGAATGGCACGAGGAACTGGGCGACATC GGTGGCCTGGCGGAGCAACTGCGGGTCGATATCGAGCCGGACAGGGTCTACGTCTTCACTCCCGACGGCCATGCCATCGACCTGCCCAAGGGCGCGACCC CGCTGGATTTCGCCTATCGGGTCCACACTGAAGTCGGGCACAACTGCCGCGGGGCGAAGATCAACGGACGCATCGTGCCGCTGAACTACAGCCTGCAGAC CGGCGAGCAGGTCGAGATCATAACCGGCAAGCACAGCGGTCCGAGCCGCGACTGGCTGAACAGCAACCTGGGCTACGTCACCACCTCCCGGGCGCGGGCG AAGATCGTCCACTGGTTCAAGCTGCAGGCGCGGGACCAGAACGTCGCTGCCGGCAAGGCCCTGATCGAACGCGAGCTGTCGCGCCTGGCGCTGCCGCCGG TGGATTTCGACCGGCTGGCGGAGAAGGCCAACGTGCGTACCGCCGAGGATATGTTCGCCGCTCTCGGCGCCGGCGACCTGCGCTTGGCGCACCTGGTCAA CTATGCCCAGCAACTGGTCGAGCCGGACCGCGACAGCGAGCAACTCGAACTGATCCCGCGCAAGCCGAGCAAGATCGGCCACGGCAAGCGCGGCGACGTG CAGATCCAGGGTGTCGGCAACCTCCTGACGCAGATGGCCGGCTGCTGCCAGCCGCTGCCGGGAGATCCCATCGTCGGCTACATCACGCTGGGCCGTGGGG TCACCATCCACCGCCAGGATTGCGCCACCGCGCTGCAACTGGCGGGACGCGAACCGGAGCGGATGATCCAGGTCAGCTGGGGGCCGGAGCCGGTTCGCAC CTATCCGGTGGATATCGCGATCCGTGCCTATGATCGTTCCGGCCTGTTGCGCGACGTGTCCCAGGTGCTGCTCAACGAGCGGATCAACGTTCTGGCGGTG AATACCCGTTCGAACAAGGAAGACAACACCGCGACCATGCAACTGACCATCGAGATTCCCGGTCTGGACGCTCTTGGACGCCTGCTGGCGCGCGTCTCGC AACTGCCCAACATCATCGAGGCGCGGCGCAACCGTACGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGAGGCGGAAACAGGCCACGGGCGCTCGCAGGCTGCCCGTGGCCTTTTCGTTTCCGGAAAGGGCAGAATGCCCGGACCGTTCACTGAAGACCCGAGAT ACCCATGTACCGACTCGACGACCTGCTCCACCTCATGGCGCGCCTGCGCGATCCCGAATTCGGCTGCCCCTGGGATCTCCAGCAGAGCTACGCGACCATC GTCCCGCACACCCTGGAAGAAGCCTACGAAGTAGCGGACGCCATAGAGCAGGGGGATTTCCCGCAATTGCGCGAGGAACTGGGCGACCTGCTGTTCCAGG TGGTCTATTACAGCCAGTTGGCTCGCGAAGAGGATCGCTTCGCTTTCGACGAGGTGGTGGACGGCATCACCCGCAAGCTGATCCGTCGACATCCCCACGT ATTCCTCGATGGCGATCTCTATGGCAAGCCCGATGCGGCGAAGCTGGCCGAAGCGGCGGTCAAGCAGCGCTGGGAAGAACTGAAGGCCGAGGAGCGTGCC
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAHQPVNTDGSINLEAWLDHVQNLVPGLDRQGLLEACEFARESEQRAIAAQNSWAEGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKIT LEAVNKHFGPVVAKLIEGVLRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNADEEKRHRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQYIANVMSQLKEALAATGVQADLSGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVLVPEMRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHSMHEEAELGVCAHWRYKGTDVKASSNHYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEVGHNCRGAKINGRIVPLNYSLQTGEQVEIITGKHSGPSRDWLNSNLGYVTTSRARA KIVHWFKLQARDQNVAAGKALIERELSRLALPPVDFDRLAEKANVRTAEDMFAALGAGDLRLAHLVNYAQQLVEPDRDSEQLELIPRKPSKIGHGKRGDV QIQGVGNLLTQMAGCCQPLPGDPIVGYITLGRGVTIHRQDCATALQLAGREPERMIQVSWGPEPVRTYPVDIAIRAYDRSGLLRDVSQVLLNERINVLAV NTRSNKEDNTATMQLTIEIPGLDALGRLLARVSQLPNIIEARRNRTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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