Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCCTGGATCTCCATCGCGCGGAATACCCCGGCGCTGTTCCAGATCTACATCCTCTACTTCGGCCTGGGCTCCTTCGGCCTGCACGTCAGTTCCTGGTTC GCCCTGCTCGCCGGGGTCACCTTCAACAACGCCGGCTACCTCGCCGAGACCTTCCGCGGCGGCCTCCAGGCGGTGCCCGAGACCCAGTTGCGGGCGGCCC GCTCGCTGGGCATGAGCGCGCCGCAGGCCTATCGCCTGGTGGTGATCCCGCAGCTGCTGCGGGTGGTGTTCTACCCGCTGACCAACCAGTTGGTCTGGGC CATGCTGATGACCTCCCTCGGCGTGGTGGTGGGCCTGACCGACGACCTCACCGGCGTCACCCAGGCACTCAACGTCAAGACCTTCCGCACCTTCGAATAC TTCGCCCTGGCCGCCGTCCTCTACTTCGCCATGGCCAAGCTGCTGGTGCTGGCCGCCCGCCTGCTGGGCTGGCGCCTGTTCCGTTACTGAGGGGAATGCC
|
|
DNA Sequence for Gene |
>Q087_03376
GTGTTCACCACCAGCCTCACCGCCAACGACCTGCTGTTCCTCCTGCAAGGCGCCTGGACCACCCTCGCCATCACCGCCATGGCGATGCTGATCGGCACCC TGCTGGGTGTCGTCTTCGGCCTGCTCCGCGCCCTGCTGCCACGCGCCAGCCTGCCGCTGGCGGCGCTGCTCGACGTATTCCGCAGCGTGCCGCTGCTGAT CCAGTTCGTCCTGCTCAATTCCTTCAAGAGCATCCTCGGCCTCGACTGGAGCGCCTTCGCCGTGGCCTGCCTGGTGCTCGGCGTGTACGCCGCCGCCTAC TGCACCGAGGTGGTCCGCGGCGGCGTCCTCTCGGTACCGCCGAGCGTGCGCCGGGCGGCGCGTTCCCTGGGCCTGAGCTATCGCCAGGACCTGTTCCACA TCGTCCTGCCGATGGCCGCCCGGGTGGCCTTCCCCGGTTGGGTCAACCTGACCCTGTCGGTGATGAAGGACACCTCGCTGGTGCTCTGGATCGGCATCGT CGAACTGCTGCGCGCCTCGCAGACCATCGTCACGCGCATCCAGGAACCGCTCTTCGTGCTCTGCATCGCGGGGCTCGTCTATTACCTCATGAGCTGGGTG GTCGCGCGACTCGGCGCCCGGCTGGAACGGAGATGGCAGCAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGAGATCAGCGGCGTGCACAAGGCCTACGGCCAGTTCGAGGTGGTCAAGGGTGTAGACCTGAGGGTGGACAAGGGCGAGGTGCTGTCGATCATCGGCGG CTCCGGTTCCGGCAAGTCGACCCTGCTGATGTGCATCAACGGCCTGGAGCCGATCCAGCGCGGCAGCATCCGCGTCGACGGCATCGACGTGCATGCCCGC GGTACCGACCTCAACCGCCTGCGGCGGAAGATCGGCATCGTCTTCCAGCAGTGGAACGCCTTCCCCCACCTGACCGTGCTGGAAAACGTCATGCTCGCGC CGCGCAAGGTGCTCGGCAAGAGCCGCGCCGAAGCCGAGGCGATGGCGCTGAAGCAACTCACCCACGTCGGTCTCGGCGACAAGCTCAAGGTCTTCCCCCA GCGCCTTTCCGGCGGCCAGCAACAGCGCATGGCGATCGCCCGGGCGCTGGCGATGTCGCCGGACTACATGCTGTTCGACGAAGCCACCTCGGCGCTCGAC
|
|
Amino Acid Sequence |
>amino acid ABC transporter
MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDVFRSVPLLIQFVLLNSFKSILGLDWSAFAVACLVLGVYAAAY CTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWV VARLGARLERRWQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|