Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCACCGCTGGCCTTCCGCATGCGCCTGGCGCCCTGGTCGACATTGCTCGGCCTGGCGCTGATGGCGGCGATCCTGGTCACCACCTTCTTCACCGAGGC GTTCCGCATGACCCTGGTCTTCGGCGTGCCGTTCCTCGCGCTGCTCAGCGCACTCTACCTGGTCTTCGTCCGCAAGCCCGGCAGGGATTGTCCGATAGAA CGGGCAACGCCCTAGGCGCTCTCCGCCCTGCGAACCTGGCGCGCACGGCGAAGCCCGACCGGCGCGCCCTTTCCGGACCGGGCGGTTCCGTTTCCCATAC CTTTTCCGTCGCACAAAAAGCATTACCCGCCGGCCGCCGCGACTCCGTAGCGTAGTGCCCAACCGGACGTTCCGGCCCGCGGCGCGCCGCGGCCGGCGCG CTCCCGTCAGGGACGAAGTGGCGGCACGCCCAGCCATCGAGCGCACTGCATCGCTCTGCCCTGTGGGGACGCAGACGTCGTCAGCCATGAGGGGAACACG
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DNA Sequence for Gene |
>Q087_02530
ATGCATCCGACCTTTTCGCGGGTCCTGCTGGCCGCCGCACTGGCCGCCGCCGGCAACCCTGCCGTCGCCACCGAAATCCAGCTCGAGCAAGGTTGGAACG CCGAGCAGCGCGCCTCCTGGTACGACGCCTCGCTCGGTTCGCGGCTGCTGCCGCTGGCCTGGGCCCAGGCGCTGGAGCGTCCGGACAGCGAGGAGCGCCT GTTCTCCGAAGACAACGCCCGGCGCCTCGGCTTTCCCCTGCGCAACTGGCAAGGCGGCGAACTGCGCCTGCCGCGCGGCTTCGCCCTCGACCAGCAGGAC GACAGCCAGTTCTCCGACACCCGCCTGCGCTGGAAAGCCCGCCAGTCGTCCAGCGAACCCTGGGTCGGGCTGAATTGCGCCGGCTGCCACTCCACCGACA TCAGTTACCGCGGCAGCGAACTGACCGTCGACGCCGGCGCCACCCTGGCCAACGTCCAGGCGATCTTCGACGAAGTGCTCGCCGCGCTGCGCCGCACCAG CGACGACGGCGACAAGTTCGCGCGCTTCGCCGGCAACGTCCTCGGCAGCGAGGACAGCCCGGCCAACCGCGAGCTGCTGAAGGCCGCCCTGGTCAAACGC GCGGCGCTGATCGACACCCTGCTGAGCATGTCCGCGACCGACCTGCAACCCGGCCCGGGGCGCCTCGACGCCACCGGCCAGTCACTCAACCGCGCGGCAA TCAACTCCGGCGCCCGCCATCTGCAAGCGAACCCGACCGACGCGCCGACCAGCTTCCCGGCACTGTGGCACACGTTGCAGATGGACAAGCTGCAATCCAG CGGATTCGTGCCCAACGTCAAGGTCCTCGACCTCAACGGCCAGGTCTTCGACCTCGGCTACCTGGCCGGCGACATCGGCGTGGTCCAGGGCGACTACGGC GACGTGGTCAGCCATCCGCTGTCCGGCCTGGAGGGCTATATATCGAGCATCCGCGTGGACAACCTGACCCGTGTCGAGGGCCTGATCCACAAGCTCAAGG CGCCGGCCTGGCCGAGCCAGCTGTTCGGCGCCCCGGACAGCGCCAGGCTGGCCCAGGGCAAGCGCCTCTACGAGGAGAACTGCGCGGCCTGCCATGCGAG CATCGGCCGCGACGACCTGCAAACCCCGATCAAGGTCCGCCAGGTGCGCCTGAAGGCCCATGGCGACGACGCGCCGATCGGCACCGACCCGTGGATGGCC TGCAACACCTTCACCTTCAGCAGCCCCAGCGGCAACTACTTCGGCCTGTTCCGACCGTCCCTCGGCACCCCCAGCGGCGTCGGCATCGTCGGGCGGACTT CGAAGATCGCCGACATGCAGGTCCCCGAGGTGTTCCAGATCATGCTCGGCAAGAAAGGCCAGCTGGCCGACGGCATCGCCGAGATCATCCACGCCATCGT CACCGGGCAGCAGACCCTGCCCGGCTCCGACAGCCTGCAAGCGGTGCCCGCCGGACAATTGCTGCTGGCCGGCGCCGCCCCTGCCGACAGCCAGGCGCAG AGCCTCGCCGCCGGCGAAGTCCCCACCGACAAGAGTGCGCGCAAGGACTACTGCCTGACTACCGAGCATCCATTCCTCGGCTACATCGCTCGCCCGCTGA ACGGCATCTGGGCCACCGCACCCTACCTGCACAACGGTTCGGTGCCGTCGCTGTACGACCTGCTGCTGCCCCAGGAGCAACGGCCGGCCACCTTCTACAC CGGCAGCCACGAGTTCGATCCGAGCCGGGTCGGCTACCTCACCGCGCCCGGCCCGGACAACGCCTTCCTTTTCGACACCCACCTGGAAGGCAACTCCAAC GCCGGCCACGACTTCGCCCGCGAGTACGACGAAAGCCAGCGCCTGGCGCTGCTCGAATACCTCAAGACCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGCCCCGCCCACATGCCCAATAGAGAGAACCGCCCGATGACCCTATCGCGACTCAGCCTTGCCATCCTTTCCGTCCTCGCCGGTGCCCCGGCATTCG CCGACGACAGCGGCGTCGACCTCGACCAGGGCTGGAACCAGACCCAGAAGACCGCCTGGCTGGAAGCCGGCCAGGGCTCGCGGATGCTGCCGCTGGCCTG GCTGGTGGCGCTGGAGCAGCGCGCCAGCGAAGAACCGCTGATGTCCGATGCGCTGATCCGCCAGTACGGCTATGTCCCGCACACCCTCGGCGGTTCCAGC GTGAAGGTGGTGCAGGGCTACGCGGTCGACCGCAGCGACGACAGCGACCTGACCTTGACCAAGCTGCGCTGGAAAGCCCTGCAGGGCTCCAGGGAACCCT GGGTCGGACCGACCTGCAGCATGTGCCACACTTCGCACATCAGCTACCAGGGCACCCAGCTGACCGTCTACGGCGGGCAGACCATGGGCGACCTCGCCGG
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Amino Acid Sequence |
>hypothetical protein
MHPTFSRVLLAAALAAAGNPAVATEIQLEQGWNAEQRASWYDASLGSRLLPLAWAQALERPDSEERLFSEDNARRLGFPLRNWQGGELRLPRGFALDQQD DSQFSDTRLRWKARQSSSEPWVGLNCAGCHSTDISYRGSELTVDAGATLANVQAIFDEVLAALRRTSDDGDKFARFAGNVLGSEDSPANRELLKAALVKR AALIDTLLSMSATDLQPGPGRLDATGQSLNRAAINSGARHLQANPTDAPTSFPALWHTLQMDKLQSSGFVPNVKVLDLNGQVFDLGYLAGDIGVVQGDYG DVVSHPLSGLEGYISSIRVDNLTRVEGLIHKLKAPAWPSQLFGAPDSARLAQGKRLYEENCAACHASIGRDDLQTPIKVRQVRLKAHGDDAPIGTDPWMA CNTFTFSSPSGNYFGLFRPSLGTPSGVGIVGRTSKIADMQVPEVFQIMLGKKGQLADGIAEIIHAIVTGQQTLPGSDSLQAVPAGQLLLAGAAPADSQAQ SLAAGEVPTDKSARKDYCLTTEHPFLGYIARPLNGIWATAPYLHNGSVPSLYDLLLPQEQRPATFYTGSHEFDPSRVGYLTAPGPDNAFLFDTHLEGNSN AGHDFAREYDESQRLALLEYLKTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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