Strain | Pseudomonas aeruginosa C40 genomic scaffold adgfO-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGACCGCCTGCCACCCGCGACCCTTGCCGGTCGCGGGTCCATAGTGCCTCTCCTTCCATTTCCTCCGGTGCGCGCATGCCCCTGCCCATCCCCAGCCTGC TGATCGCCGGCATCGGCTACCGCCGAGGCTGTAGCGCCGAGCATCTGCGCGCGCTGCTGGAGCGAACGCTGGGCGAACACGGGCGCAGCCTGGCCGAGCT GGACGCCCTCGCCAGCATCGACGGCAAACGCGACGAACCCGGCCTGCGGCAACTGGCCGCGCTGCTCGAACGCCCCGTGCATTTCCTCGCACCCGCCGTC CTGCACGACTACGAGCCGCGCCTGCTCAGCCCCTCCGCCGTCGCGCTGCGCGAAACCGGCTGCTCCAGCGTCGCCGAGGCCGCCGCCCTGGCCCTGGCCG AACGCCTGGGTGGCGGTCGCGCCGATCTGCTCGGCGCGAAACGCAGCGACGATCGGGCGAGCATCGCCCTGGCACGTCTTCTCACCGAACGAGAACTCCC
|
|
DNA Sequence for Gene |
>Q087_01358
ATGACCGTCTATTTCATCGGCGCCGGTCCCGGCGACCCCGACCTGATCACCGTCAAGGGGCAGCGCCTGATCCGCCAGTGCCCGGTGATCCTCTACGCCG GCTCGCTGGTTCCGCAAGCGCTGCTCGAGGGGCACCAGGCCGGCCAGGTGGTGAACACCGCCGAGCTGGACCTCGAACAGATCGTCGAGCTACTCGCGCA AGCCCATCGCCGCGGCCTCGACGTAGCCCGCGTGCATTCCGGCGATCCCTCCCTGTACGGCGCCATCGGCGAGCAGATCCGCCACCTGCGCGAACTCGGC ATCCCCTATGAGATCGTCCCCGGGGTCACCGCCACCGCCGCCTGCGCCGCCCTGCTCGGCTGCGAGCTGACCCTGCCCGAAGTGTCCCAGACGCTGATCC TGACCCGCTACGCCGCACGCACGAAGATGCCGGAAGGCGAGAGCCTGGGTGACCTGGCGCGGCACCGGGCGACCCTGGCGATCCACCTGGGCGTCGCCCA CCTGGCGAAGATCGTCGAGGAACTGCTGCCGCACTACGGCGCCGACTGCCCGGTCGCGGTGATCCACCGGGCCAGTTGGCCCGACCAGGAACAGGTTCGC GGCACCCTCGGCGACATCCTGCCCAAGGTCGCCGCCAGGAATTTCCGCCGCACCGCGCTGATCCTGGTCGGCGAGGTGCTGGCCGCCGAAGGCTTCGCCG ACTCTTCGCTGTACCGCGCCGAGCATCGACATCTCTATCGACCCGGCGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACCGCCGTCCTTAGGTTCGGCGCCGACCACCGGCAGCACGCCTAGACTCGTCACAAGGCTTGCGACAGCGGGCCGGCACGGCTAGCGTTCAGCGCTGGCC CCTTTTTTCCTGAAGCCTTCGGACACCCATGAAACGATTCCTCCTCGGTCTGGTTCTGCTGCTGGCGGTCGCCGCCGGCGTCCTCTACTTCGTCCCGGCT ACCCTCCTCGCCAGCGTACGCACCGTCGAGCGCGGTCTCGCCGGTCTCAGCGAGCACAGCGTGCAGGTCGACAACCTGGAGATCGCCTACCTGGAAGGTG GCTCGGAGAAGAACCCGACCCTGTTGCTGATCCACGGCTTCGGCGCCGACAAGGACAACTGGCTGCGCTTCGCCCGGCCGCTGACCGAGCGCTACCATGT GGTCGCCCTCGACCTGCCCGGCTTCGGCGACAGCAGCAAGCCGCAACAGGCCAGCTACGACGTCGGCACCCAGGCCGAGCGAGTCGCCAATTTCGCCGCC
|
|
Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPDLITVKGQRLIRQCPVILYAGSLVPQALLEGHQAGQVVNTAELDLEQIVELLAQAHRRGLDVARVHSGDPSLYGAIGEQIRHLRELG IPYEIVPGVTATAACAALLGCELTLPEVSQTLILTRYAARTKMPEGESLGDLARHRATLAIHLGVAHLAKIVEELLPHYGADCPVAVIHRASWPDQEQVR GTLGDILPKVAARNFRRTALILVGEVLAAEGFADSSLYRAEHRHLYRPGE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|